Gene TDE2490 details

Gene Information

• Locus tag: TDE2490
• Symbol: priA
• ID: 2741463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2512793
• End bp: 2514775
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637161382
• Product: primosomal protein N'
• Protein accession: NP_973088
• Protein GI: 42527990
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase
• TIGRFAM ID: [TIGR00595] primosomal protein N'

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAT GGCTTACTCT TGCCTTTAAT CTTCCACTCT ACCAAAGCTT TACCTATAAA 
AACATAGAAG AAGACGGCGG GAGCCTTGTG GGGAAAAGGG CTTCGGTTCA ACTCGGCTCA 
AGAAATTTGA TAGGCTTTAT AATAGAAGAA TCCGATGTGT TTCCTAAAGA CAGCCCTGTG 
GGAGAAGATA AAATAAAGCC GATTAAACGA GTGGTCGACA AGGAAACAAT TTTCGGGCAG 
GCACAGATAG AACTTGCCTC TTGGATTTCG CACTTTTATA TTTGCAGCTT CGGCGAAGCC 
CTCTCCGCAA TTCTTCCTTC GGGAAAAAGA GAAGTTTCTT TTGAAAACTT AAAATGGGGA 
GCCGAATTTG AAGATAAGAA TTTTTCTCTT TCCGATGAAC AAAAAGATGC CGTCGAAAAA 
ATCGTAAACT CAAACAAAAA AGAATTCTTT TATTTATACG GCTTAACCGG TTCAGGGAAG 
ACGGAAGTTT TTTTAAAGGC CGCCGAAAAG ATAATCGCAG AAGGCAAGGC CGTCATCTAC 
CTTGTTCCCG AAATAGGGCT TACCCATCAG GTTATAAGTG CGGCCGTAAA ACGCTTCGGC 
TCTCAGGCTG CCGTTTTGCA CTCGGGCCTT ACGGGCAGCG AAAGGCTCAA CCAATGGATG 
AGGATAAGAC GGGGAGAAGC CCTTATGATT GTCGGGGCGA GGAGTGCCGT CTTTGCTCCT 
GCTAAAAACA TAGGCCTTAT CATAATAGAT GAAGAGCATG ATGCTTCCTA TAAGTCGGGT 
TCCGTGCCCC GCTACCATGC CCGCCAGACT GCGATGTACT TGGCCGTAAA GCATAATTGC 
CCCGTGGTAA TGGGCTCTGC AACTCCATCG CTTGAAGCGT GGAATATGAT TCAAAACAAA 
AAAATCAAAC TCCTTTCCCT TTCAAAAAGA CTTGCAGGCG GAAGCCTTCC TCAAATCGAA 
ATAGAAAATA TTTCCGGCTT AAAGGGAGCT TTGAGCGACA GGCTTATAAG CGAAATACGC 
AAAACCAAAA ATGAAGGAAA ACAAACAATC CTCTTTTTGA ACAGGCGGGG CTTTTCCCAT 
ATTTTTAGAT GCCGTTCCTG CGGCTATGAG ATGCTTTGCA AAAACTGTTC CGTGCCGATG 
ACCTTTCATA AAAGTGAAAA TGTAATGAAA TGCCACTATT GCGGAATGCA GGCAAGGCCG 
CCTTCTCTTT GCCCTGAATG TAATTCCCTC GATATAGGCT ATGCCGGCGT CGGTACGGAA 
TTTATCGAAG AAGAAGTTTC CCGCTCCTTC CCCGACTGCA CGGTTGCGAG GATTGACACC 
GACACCGTTT CCAAAAAGAA CAGTCTTGAA AACCGCTTAA AAGATTTTAA GGATGGGAAA 
ATAGATATCC TCCTCGGAAC GCAGATGATA GCAAAGGGCT TGAATTTTCC GAAAGTAAGG 
CTTGTCGGAA TTATCCTTGC GGACACGGGC CTTCAAATGC CCGACTTTAG AGCCGCCGAA 
AGGAGTTTCG CACTTATCAC TCAGGCAGCA GGAAGGGCAG GGCGGTTCAG CGAGGATGGG 
CTTGTCATTA TTCAAACACT AAAGCCTAAT CATCCTTCGA TTGTTTGTGC AAAAAATCAC 
GAGTACGAAA AGTTTTATGA GTATGAACTC GGGCAAAGAA AGCTCTTGGA TTTTCCGCCC 
TTTAAGCGTC TGATTCGTTT GGTCTTTAGA AGCAAGGACT TAAAAAAAGC CGAGCTGGCC 
GCAGAAGGTG CTGCGAACAT TCTAAAATAT ATTCTATCTT CACAAAACAA AGACGAAGCC 
GAAATAATGG GACCCTCGGA ATGTGTTCTA TCGATGATAG CCGGAAATCA CCGCCAACAG 
ATTTTACTCC GCTCTTCAAA TTTCCCCCTA ATCCAAACCG CCGCATCCCG TTTTGTAAAA 
GAATATAAAC CGATGACAGG CATCTACATC GAGGTCGACA CCGATCCGGT CAATCTTATG 
TGA 

 

Protein sequence

MAKWLTLAFN LPLYQSFTYK NIEEDGGSLV GKRASVQLGS RNLIGFIIEE SDVFPKDSPV 
GEDKIKPIKR VVDKETIFGQ AQIELASWIS HFYICSFGEA LSAILPSGKR EVSFENLKWG 
AEFEDKNFSL SDEQKDAVEK IVNSNKKEFF YLYGLTGSGK TEVFLKAAEK IIAEGKAVIY 
LVPEIGLTHQ VISAAVKRFG SQAAVLHSGL TGSERLNQWM RIRRGEALMI VGARSAVFAP 
AKNIGLIIID EEHDASYKSG SVPRYHARQT AMYLAVKHNC PVVMGSATPS LEAWNMIQNK 
KIKLLSLSKR LAGGSLPQIE IENISGLKGA LSDRLISEIR KTKNEGKQTI LFLNRRGFSH 
IFRCRSCGYE MLCKNCSVPM TFHKSENVMK CHYCGMQARP PSLCPECNSL DIGYAGVGTE 
FIEEEVSRSF PDCTVARIDT DTVSKKNSLE NRLKDFKDGK IDILLGTQMI AKGLNFPKVR 
LVGIILADTG LQMPDFRAAE RSFALITQAA GRAGRFSEDG LVIIQTLKPN HPSIVCAKNH 
EYEKFYEYEL GQRKLLDFPP FKRLIRLVFR SKDLKKAELA AEGAANILKY ILSSQNKDEA 
EIMGPSECVL SMIAGNHRQQ ILLRSSNFPL IQTAASRFVK EYKPMTGIYI EVDTDPVNLM