| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2477 |
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| Symbol | selA |
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| ID | 2741450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2499663 |
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| End bp | 2501009 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637161369 |
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| Product | selenocysteine synthase |
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| Protein accession | NP_973075 |
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| Protein GI | 42527977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG AAAATACAAA TCCGCTTGCA AGGATTCCGC AAGTTGAAAA ACTTTTAAAT
GAAGGTATAT TAAAAAATAC GGCGGCTCTT ATCGGAAGGC CCTTTGTCGT AAAAAAGGCC
TCGGAGTATT TGGAAGACAT ACGCAAAAAG GCAAGGGCCG GAGGAGATGT TCCTTTACTT
AAGGCCTGTG CCGAAGAGAT ATGCAAACTA TGCAGACCCA TAATCCGCAC AAAAATTACG
CCCGTAATAA ATGCAACGGG GATAATCCTC CATACAAACC TCGGCCGCTC TCCCCTGCCT
GAAAATATTT GGGACAGGGC AAAGGAAACG GCTTCGGGCT ATTCTTCTAT CGAAATGGAT
TTGCGGGACG GAAACCGCGG AAAGAGGTTT GAGTTTTTAA ATGACTGTAT GAGTCTTTTG
ACCGGAGCCG AGGATGCCCT CATATTGAAC AACAATGCGG CGGCTGTTTT TTTAATGTTA
AAGGCCCTCG CAGGCGGAAA GGAAGTCATA GTTTCCCGCG GCCAGCAGGT TCAAATAGGC
GGAGGTTTCC GTATCCCCGA AATTTTGGAG ATGGCAGGCT GTAAACTCAT CGAGGTCGGC
ACAACAAATA TCACAAGCCT TAAGGACATT CAAAAAGCAA TAAACGAAAA CACGGCCATG
GTGCTTTGGG TTCATACCTC AAACTATAAG ATACGGGGCT TTACGGAGCA GCCTTCAATT
TCAGAAATCA AGGCTATCCT TCCGCAAAAC ATAATCCTCG CAGTGGATCA GGGCTCGGGA
AACCTATCCT TAAACGTTCC CGAAGAGCCC ACGGTTTCTT CAATTATAAA GGAAGGAGCG
GATTTGGTTT GCTTTTCGGG AGATAAGATT TTGGGAGGAC CGCAGGCAGG CTGGATTGTA
GGTAAAAAAA ATCTCGTTCA AACCGTAGCT AAAAATCAGC TCATGCGAAC CTACCGGGTA
GGCAGGGCAG TAGCAAGCCT TATGCAAGAA TGCCTCATCC TCTATTTAAA CGGAGGAGAA
TCGGCAGCTC AAAGGGCGCT CCTTTTAGAT CAAAAGAAAA TAAAAAAGCG TGCCGAAAAA
ATAATTGCAA GTCTAAAAAG CGGAGCCGGA GAATTGGTGC AAAAAAACTT TTCCCTGGGA
GGAGGCAGCA CCCCGGACAC GGGCTTCAGC TCTTGGGCCG TAAAACTAAA TACAAAAAAG
CCTTGCGAAA AACTAAAAAC GAATTTACGC GAAATGCCGA TTCCGATAAT AGGCTTTATC
GAAGAAGACT CTTTTTATAT TCATCCTGCA AGTATCGAAG AAAAATATGA TGAATATGTA
ATCGAGGCTT TAAACAAGTG TTTGTAA
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| Protein sequence | MAKENTNPLA RIPQVEKLLN EGILKNTAAL IGRPFVVKKA SEYLEDIRKK ARAGGDVPLL
KACAEEICKL CRPIIRTKIT PVINATGIIL HTNLGRSPLP ENIWDRAKET ASGYSSIEMD
LRDGNRGKRF EFLNDCMSLL TGAEDALILN NNAAAVFLML KALAGGKEVI VSRGQQVQIG
GGFRIPEILE MAGCKLIEVG TTNITSLKDI QKAINENTAM VLWVHTSNYK IRGFTEQPSI
SEIKAILPQN IILAVDQGSG NLSLNVPEEP TVSSIIKEGA DLVCFSGDKI LGGPQAGWIV
GKKNLVQTVA KNQLMRTYRV GRAVASLMQE CLILYLNGGE SAAQRALLLD QKKIKKRAEK
IIASLKSGAG ELVQKNFSLG GGSTPDTGFS SWAVKLNTKK PCEKLKTNLR EMPIPIIGFI
EEDSFYIHPA SIEEKYDEYV IEALNKCL
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