Gene TDE2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2472 
Symbol 
ID2739657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2495102 
End bp2496286 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content35% 
IMG OID637161364 
ProductISTde1, transposase 
Protein accessionNP_973070 
Protein GI42527972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00195439 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA AATTAAATAT GGGAAAAAAG GAAAGAACAA GGGGAAAAAT ACTGGCAATG 
GTAGTAGAGC GTCAAATAAC CTTAAAACAA GCAGCCATAA AAATGCAGGT ATGTTACAGA 
CAAGCAAAGC GTATTTACAA AAGGTATTTG GAACAAGGAG ATAAAGGTCT TTTGCATAAA 
AGTCTAGGAA AACCTTCCTC AAAAAGAGTC GATGAAAATA TAAAGAAAAA ATGCTTGGAA 
CTGTACGCTG AAAAATATCA TGATTTTGGT CCTACTCTGG CAGCAGAAAA ACTTGAAGAA 
CTTGATGGGA TAAAAATAAA TCATGAAACG CTTAGGCGAT TACTAATCAA AGCAGGTCTT 
TGGAGTAGAA AACGGCGAAG GAACATTCAT CGAAGTAGAA GAGAAAGAAG AGAATGTTTT 
GGACAGATGC TTCAATTTGA CGGAAGTCAT CATAAATGGT TTGAGCAAAG AGGACCTAAA 
TGCTGTTTAA TGAATATAGT CGATGATGCA ACAGGAATGA CACAGTCGTT TTTGACGGAA 
CAAGAGACAA CGGAAGCTGC TATGAGGCTT TTATGGGGCT GGATAGACTG TCATGGGATA 
CCTCAAGCGG TATGTTGTGA TAAAAAAAAT GCTTATGTTA TTACACGGGA GCCAACTATG 
TCAGAAATAA TAAAAAATGT AAGGCCTAAA ACCCCGTTTC AAAAAGCTTG TGAAAAACTT 
GGAATACAAA TAATAGTGGC TCATTCGGCT CAATCTAAAG GCCGTGTAGA AAGGAATCAT 
AGTGTTTATC AAGACAGATT TGTAAAAGAA TTACGCCTTG CAAAAATAAA TACTATTGAA 
AAGGCTAATG CTTTTTTACA AAAAGAGTAT TTACCGAAAA TAAATAAAAA GTTCGCCATT 
GCACCTTTAG ACTCACAAGA TGGGCATGCT CCTTGTCCAA GTAAAGAACA GCTTGCTAAT 
ATTTTCTGCT ATGAAGAACA AAGGGTTGTA AGTAATGATT TTGTTATCAG GTATGAAAAC 
AGACTTTTTC AAATAACAAA ATCGAACCGT AATATACCGA GACCTAAAAC AAACATATTG 
TTAAGAGAAC TCTTGGATGG AACCATAAAA CTAATATGGA ACAACAAAGA GCTTGATTTC 
TTAGAAATAA CTAAAGAGTA TCTTAAGGAG GTAAAATTAT CATAA
 
Protein sequence
MEEKLNMGKK ERTRGKILAM VVERQITLKQ AAIKMQVCYR QAKRIYKRYL EQGDKGLLHK 
SLGKPSSKRV DENIKKKCLE LYAEKYHDFG PTLAAEKLEE LDGIKINHET LRRLLIKAGL 
WSRKRRRNIH RSRRERRECF GQMLQFDGSH HKWFEQRGPK CCLMNIVDDA TGMTQSFLTE 
QETTEAAMRL LWGWIDCHGI PQAVCCDKKN AYVITREPTM SEIIKNVRPK TPFQKACEKL 
GIQIIVAHSA QSKGRVERNH SVYQDRFVKE LRLAKINTIE KANAFLQKEY LPKINKKFAI 
APLDSQDGHA PCPSKEQLAN IFCYEEQRVV SNDFVIRYEN RLFQITKSNR NIPRPKTNIL 
LRELLDGTIK LIWNNKELDF LEITKEYLKE VKLS