Gene TDE2442 details

Gene Information

• Locus tag: TDE2442
• ID: 2739867
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2472561
• End bp: 2473256
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 637161335
• Product: surface protein, putative
• Protein accession: NP_973041
• Protein GI: 42527943

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000653811
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAAAA TTAATTTTTT GGTTATTTTT TTATATATTT TTATGTTCGT GATGAAGCTA 
TATCCTAATA ATACTGATAC CAATATAGAT TCTTTTGAGT ATGTTTTTAA TGTGCAAAAA 
AATTATATTG TTATTTCAAG ATATATCGGT AAGGAAATGA AAGTAACTAT TCCTGAAAAA 
ATAGATGGGT GCCCGGTAGG TGAAATTGGT GAGTACTGCT TCTTTGGAAA TTCCTATATC 
AAATCTGTAA TATTACCTGA TTCTATTGTT ATAATTAATA ATAATGCTTT TAGAAATTCA 
TCTCTTACTA AAATAGTATT ATCAAATTCT TTAAGATATA TTGGTGATAG TGTTTTTTGT 
GATACTCCAT TAAAAAGTAT TATTTTACCT GACGGGTTAG AATATATCGG TGAATATGCT 
TTTTATAATA CAGCTATTAC AAGGCTAATT ATTCCTGATT CTGTAAAAAA AATTGATTGG 
TGGGCTTTTG GTAATTGCGA AAAATTGGAA TATATTAAAT TATCTAAATC TTTGGATCAG 
ATTCCATCTA GATTTTGTGA AAATTGTATA AATTTAAAGG ACATAGAAAA TATAGGTTTC 
TGTCCAGTCC AGTCTACAGC CTTTGTAGGA TGTCGGAAAC TTCCTATTAC AGTTAGAAAA 
AAATTGATTG ATGCAGGTTA TGGCAATAAC TTTTAA 

 

Protein sequence

MYKINFLVIF LYIFMFVMKL YPNNTDTNID SFEYVFNVQK NYIVISRYIG KEMKVTIPEK 
IDGCPVGEIG EYCFFGNSYI KSVILPDSIV IINNNAFRNS SLTKIVLSNS LRYIGDSVFC 
DTPLKSIILP DGLEYIGEYA FYNTAITRLI IPDSVKKIDW WAFGNCEKLE YIKLSKSLDQ 
IPSRFCENCI NLKDIENIGF CPVQSTAFVG CRKLPITVRK KLIDAGYGNN F