Gene TDE2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2438 
Symbol 
ID2739863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2468055 
End bp2469347 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content40% 
IMG OID637161331 
Producthypothetical protein 
Protein accessionNP_973037 
Protein GI42527939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.1503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA AAAAAAGATA CAAAAAAACG GATATAGAAT TCTCTCAGCC TAAAAAAACT 
CCATTGATTG TCAGGTTTGT GCTTTGGATA AAGCATATTC CTGCAAGCGA TATTTTTAGA
ATACTGGCAG GTTTTGCATT TATTTTTCTT GTATTGGTTG TAATTATCTT TGTTTCGGAA
GCAAACAGTA ATTCAAGGAT TAACAATTTT TTCGATGCCT TTTGGTATTC TCTTGTAACT
ATCACAACCG TCGGTTACGG AGACATTACT CCCTCAACCA TCTTGGGCCG CTTGGCCGGT
ATCATTCTTC TTCTTTTTGG AGTTGTAGCT TTTGCAGGAG TGAGCGGAAA AGTTGCATCG
TTCTTTTTTG ATAGACAGGT AAAAAAAGAT AGGGGGCTTA TTAGATTGGA AAAGATAAAA
AATCATTTTT TGATATGCGG CTGGAAGCCT AATTTTGACA GGATTCTTTT AGGGATTATT
TCTTCAAACC CCGATATTCC CATAGACCAT ATTGTGCTTA TAAATAATGC AAGCCCCGAA
AATATGGATA TAATCAAAAC CGACAGACGC TTTAAGGGGC TTATCTATCT ATTCGGGGAT
TATACCGATG AGGCGACCTT GCTCCGTGCA AATGTAAGAT ATGCAGAGCG GGCTCTCATT
CTTTCAGACT ATTCGCAAAA TGCTTCCCCC ATGGAAATAG ATTCGCGCAC GGTACTTGCG
GTTCTCACAA TAGGAAGCCT TAACTCCCAT ATATATACGG CCGCCGAGCT CATCGACTCA
AAATTCCGGC AGCACCTTTC CCTTGCTCAC TGTGATGAAA TTATTTTAAG TACCGATTAT
GAAAGGAGTA TTTTAGTTTC GGCTTCAAGC GGTACGGGGC TTAGCCATGT TTTAAGAGAG
CTGATCACGG AAAAATCAGG CGAGGGGCTT ATCATAAACG ATATTCCTTT TGAGTTTATA
GGCAAGACCT ACCGCGAATA CCGCCGCAGT CTTTCTGGCG GCCGCGTTTT AATAGGCCTT
TTGGAAAATA CGGGGAACTT TTACAGCCGC CGAAAAGAAG CCCTGCACGA GGCTCAAAAA
AATCCCAATA TTCAGCAGAT AGTAAATAAC CTAAAAAAGA TAAAACGGCT TAAAAGCAAC
GAACCTATTT TGACTCCGCC CGATGAGTAT ATAATAAAGC CTAATTCCAG AGGTATCTTT
GTTTCAGGAA GAAAACGTAC CGACTTTACC CTTGACGGAA CGGCTCTTGA CGACTCCCAA
ATTTTAAATG AAGGAGGATC TGATGACAGA TAA
 
Protein sequence
MKEKKRYKKT DIEFSQPKKT PLIVRFVLWI KHIPASDIFR ILAGFAFIFL VLVVIIFVSE 
ANSNSRINNF FDAFWYSLVT ITTVGYGDIT PSTILGRLAG IILLLFGVVA FAGVSGKVAS
FFFDRQVKKD RGLIRLEKIK NHFLICGWKP NFDRILLGII SSNPDIPIDH IVLINNASPE
NMDIIKTDRR FKGLIYLFGD YTDEATLLRA NVRYAERALI LSDYSQNASP MEIDSRTVLA
VLTIGSLNSH IYTAAELIDS KFRQHLSLAH CDEIILSTDY ERSILVSASS GTGLSHVLRE
LITEKSGEGL IINDIPFEFI GKTYREYRRS LSGGRVLIGL LENTGNFYSR RKEALHEAQK
NPNIQQIVNN LKKIKRLKSN EPILTPPDEY IIKPNSRGIF VSGRKRTDFT LDGTALDDSQ
ILNEGGSDDR