Gene TDE2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2433 
Symbol 
ID2739858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2462624 
End bp2463325 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content40% 
IMG OID637161326 
Producttreponemal membrane protein, putative 
Protein accessionNP_973032 
Protein GI42527934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00220902 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TTATCACAAT TTTAATATTT TTACTGGTTT TAATACCTCT TTTTGCCCTC 
TCCTATGATG ACAATGAATA TCAAAGAAAA AGCAGGGCTT ATATGGAACT TGCAACAAAG 
GCCTATGATG AAGGAGATTA CGACGCTGCC ATAGAATACT CCAAACTTGC AGAAAGCTAT 
GCACAGCAAT CCTCCGAGTT CATTCAAAGA ATGCTGGCTA AAACCGAAGC TGAACAAGAA 
ATGAACAAGG CCCGTACCAG ATTCACTTGG GCAAAGGCAA ACGGAGCCGA AGAAAAATAT 
CCAGATGCTT ATAAAACTGC GGAAGAAGCC TTAAACGCAG GAAGCATAGC CTTCGATAAC 
GAAAACTATG ATGTAGCAGT CGTATGCGCC CAAAGAGTAA TGGATGCTCT TTCGGTAGTT 
AAGGGAAAGG ATGACACAGG CCTTGCAGAA CTTCCTTCTC AATATAGAAT CAGGACGTGG 
AGAGGGGAAA GGGACTGTTT GTGGAATATT GCAGCCAAAA AAGAAGTATA TGGAAATCCA 
TTTATGTGGC GTAAGCTGTA TGAAGCCAAT AAGGATAAAC TCCCTGATCC GACAAATCCC 
AACTGGGTGG AACCGGATAT TATTTTAACG ATTCCGTCCA TTAAAGGTGA AAAAAGATCA 
GGTCTCTACG ATCCTTCAAT AAGCTATAAA CACTTTAAAT AG
 
Protein sequence
MKKLITILIF LLVLIPLFAL SYDDNEYQRK SRAYMELATK AYDEGDYDAA IEYSKLAESY 
AQQSSEFIQR MLAKTEAEQE MNKARTRFTW AKANGAEEKY PDAYKTAEEA LNAGSIAFDN 
ENYDVAVVCA QRVMDALSVV KGKDDTGLAE LPSQYRIRTW RGERDCLWNI AAKKEVYGNP 
FMWRKLYEAN KDKLPDPTNP NWVEPDIILT IPSIKGEKRS GLYDPSISYK HFK