| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2431 |
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| Symbol | |
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| ID | 2739856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2459260 |
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| End bp | 2461539 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637161324 |
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| Product | bacteriocin ABC transporter, ATP-binding/permease protein, putative |
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| Protein accession | NP_973030 |
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| Protein GI | 42527932 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter
[TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00637775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATATTAA CTAATAATAC TCTTTTTTTA CTCTTTTTTC AAGCTGTAAT TTTTTTTTCT
CACATATTTA AAAAATTACT ATTAATTACA AAAAAAAACT ATAAGAATTA TAGAGAGGTA
TATATGAAAA ATATAATTTT ACAAAAAACC CGTGAAGATT GCGGAGCTGC ATGTATTGCA
AATATATGCA GGCATTATGG GAAGCCGATC GATATAGATA AGATAAGAAG GCTGTTTCAA
GGCGGTAAAA GGGGAGCTTC AGGTTTGGGC ATAATTCATG CTGCCGAGAC CTTAGGGTTT
TCATGCCGAG GGGCTCTTTC TGAATCAAAA GAAATCCCAA AAAATATTCC TATGCCCTTT
ATTGCTCATG CTGTAAGGGG GAGCGATAAC CATTATCTTG TCGTTTATAA ATCGGATTCA
AACTATGTTT ATTTGGCGGA TCCCTCCGAA GGATATAAAA AAATAAACAC AGAGGTTTTT
CAAAAAAATT GGACAGGCGC TTTTTTTATA CTTTTGCCCC AGCCGGATTT TTCCGAAAAA
AGTGCTTCAT CAAAGGGCTT AACCAGATTT TTGCCTATTT TAAGGTCTCA CAAAAAAATA
TGTGCGGAAA TTTTAATAGC GAGCATTATC CTGTCTTTTT TGGGCATTAT TAGTGCGTTT
TATTTTAGGT TTTTGATTGA TGAGGTACTA AGCTCCAATT TAAGAGAGAC TCTTACCGGT
TTTTCGGTAG GCTTTTTGGG CGTAATTATT TTTAGAAGCC TTTTGGGTTT GGCCAGAAAT
CAGCTTTTGA TGAGTATGAG TTATAAGATT GATACGGTTT TGGTCTATCG ATATTTTGAG
CATGTTCTTC ACTTACCGAT GCGTTTTTTT ACGGGAAAAA AGACCGGAGA GCTTGTTGCA
AGGATGAACG ATACTGTTAC GATAAGGCAG GTTATTTCCG CTACGGCCCT GACCGTTGTT
TTAGATTCAT TGATGCTTAT TTTCGGAGCA ATATTTTTAA TCTCCCTCGG TTCAAATCTG
CTTGTTGCAG CCCTTGTGCC TGTGGTGGTA AGTTCGGTTT TGGTATGGCT GTATGCAAGG
CCTTATCAAA AAATGATAAG GGCCAGGGCC TCCGCCGAGG CCGAAAAACA CTCCTGTATT
GTTGAAAGTC TTAACGGAAT AGCTACGATT AAGGCCTTGG GTGCCGAATC TAAGGCCCTT
GAAAGAGCCG AGTTTAAAAT CGTAAGTGCC ATCAGAAAGG GTATCAAACT TGCATCTTTT
TCCAATTATC AAAACAGCCT CCAAAATTTT ATCGGAAGAT GCGGAACCTT GGCTATTTAT
TGGCTCGGAA GTTTAAATAT CTTAAACGGT TCAATGTCTT TAGGCCAATT AATTTCCTTT
GTCATCCTTT CAGGTTATTT TTTGGATCCT CTTGCAAGGC TTTTAACTCT TCAGCCACAG
CTTCAAGAGG CCTATGTTGC AGCGGAAAGG CTTGCTGAAA TCTTTGATGA AGAAACCGAA
GAAAATTTGG ATAAGGGAAA AATCGAATCG AATGGCCTTG CAGGCAAAAT CGATATAAAA
AATTTATCCT TCGGCTACGA TTCCCATTCA AAAAATTTGA AGAACATAAA TTTAAGTATA
AATCCCGGGG AAAGGGTCGC CTTTGTCGGT GCTTCAGGTT CCGGCAAGAC CACCCTTGCA
AAGCTTTTGA TGAAATTTTA TTCTGCACAG GAAGGGGATA TTTTTGTAGA CGATATAAAC
CTAAAAGACT TAAAAAACGA TTCTTACCGT AAGCAAATAG GCTATGTTCC TCAGGACATT
CTCTTGTTTT CGGGAACGAT AGCGGAAAAC ATAAATTGGA GTTCAGGAAA CGGTGATTAC
AGGCGGATGA TGGCAGCTGC CGAAGTTTCA GGCGCTGCTT CTTTTATCGA ATCCATGCCC
GATAGGTACA ATACCCTTGT CGGGGAGCAA GGCACCACCC TTTCCGGAGG AGAAAGGCAG
CGTATAGCTA TTGCACGTAT CCTTTTACAC AATCCATCCA TGCTGATTTT GGATGAGGCT
ACTTCAGCTC TGGATGGAAT TTCGGAAGCG GAAGTTTTGA ATACTCTCAA AGAAATCGGT
GCAGGCCGGA CTTCGATAAT CATAGCTCAC AGGTTAAGCT CAATCAAGGA CTGCGATAAA
ATCTTCGTGT TCGATAAGGG CGAAATAGCC GAGGCGGGAA CACACGCAGA TTTGCTCGAA
AAATACGGGG TTTATTCAAG ATTATGGGAA ACACAAAATA TGGAGGAGGT TGTAGCATGA
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| Protein sequence | MILTNNTLFL LFFQAVIFFS HIFKKLLLIT KKNYKNYREV YMKNIILQKT REDCGAACIA
NICRHYGKPI DIDKIRRLFQ GGKRGASGLG IIHAAETLGF SCRGALSESK EIPKNIPMPF
IAHAVRGSDN HYLVVYKSDS NYVYLADPSE GYKKINTEVF QKNWTGAFFI LLPQPDFSEK
SASSKGLTRF LPILRSHKKI CAEILIASII LSFLGIISAF YFRFLIDEVL SSNLRETLTG
FSVGFLGVII FRSLLGLARN QLLMSMSYKI DTVLVYRYFE HVLHLPMRFF TGKKTGELVA
RMNDTVTIRQ VISATALTVV LDSLMLIFGA IFLISLGSNL LVAALVPVVV SSVLVWLYAR
PYQKMIRARA SAEAEKHSCI VESLNGIATI KALGAESKAL ERAEFKIVSA IRKGIKLASF
SNYQNSLQNF IGRCGTLAIY WLGSLNILNG SMSLGQLISF VILSGYFLDP LARLLTLQPQ
LQEAYVAAER LAEIFDEETE ENLDKGKIES NGLAGKIDIK NLSFGYDSHS KNLKNINLSI
NPGERVAFVG ASGSGKTTLA KLLMKFYSAQ EGDIFVDDIN LKDLKNDSYR KQIGYVPQDI
LLFSGTIAEN INWSSGNGDY RRMMAAAEVS GAASFIESMP DRYNTLVGEQ GTTLSGGERQ
RIAIARILLH NPSMLILDEA TSALDGISEA EVLNTLKEIG AGRTSIIIAH RLSSIKDCDK
IFVFDKGEIA EAGTHADLLE KYGVYSRLWE TQNMEEVVA
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