Gene TDE2423 details

Gene Information

• Locus tag: TDE2423
• Symbol: rplJ
• ID: 2739848
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2453507
• End bp: 2454124
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637161314
• Product: 50S ribosomal protein L10
• Protein accession: NP_973022
• Protein GI: 42527924
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0244] Ribosomal protein L10

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAA GAACAAAAAA TCCGAATCGC CAAAAAACCG AAGCGATTGA AAGCATCAAA 
AACGATGTAA AAGCCTCCTC CGCTTTTATT TTTACCGAGT ACAGAGGCTT AAAGGTTGAG 
CAAATCACTG AGCTCCGCAA AAAGCTCAGA GAAAATGCTT GCACATACAA GGTTGTACGC 
AATAATTTTG CACGCATTGC TTTTGAAGAT GCCGATATTA AGGATGTAGA TTCTTGGTTA 
ACCGGACCTA CAGCCTTGGC TATGATTGCA GAAGATGCAA ACCTTGCCGC TAAGACCTTG 
TTTGAATATG CAAAAGATGC TCCGGCTCTT GTAATTAAGG GCGCGGTAGT TGACGGTGAA 
ATTTATGATG CCAAGCAAAT CGAGGCATTT TCGAAACTTC CCGGCAAAAA AGATCTTATT 
GCAATGTTTA TGTCTACAGT CAATGCTACA ACTTCCAAGT TTGTACGCAC CTTACAGGCG 
ATTGTGGATA AGGGCGGCGC CCAAGGTGCA GCTCCCGCAG AAGCAAAAGC TGAAGCTCCT 
GCTTCAGAGG AAAAAGCAGC TGATACGCCG GCCGAACAGC CTGCAGAGTC TGCTCCCGAA 
GCAGCTCCCG AGGCTTAA 

 

Protein sequence

MALRTKNPNR QKTEAIESIK NDVKASSAFI FTEYRGLKVE QITELRKKLR ENACTYKVVR 
NNFARIAFED ADIKDVDSWL TGPTALAMIA EDANLAAKTL FEYAKDAPAL VIKGAVVDGE 
IYDAKQIEAF SKLPGKKDLI AMFMSTVNAT TSKFVRTLQA IVDKGGAQGA APAEAKAEAP 
ASEEKAADTP AEQPAESAPE AAPEA