Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2403 |
Symbol | |
ID | 2740705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2428731 |
End bp | 2429372 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637161294 |
Product | metallo-beta-lactamase family protein |
Protein accession | NP_973002 |
Protein GI | 42527904 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTA CGGAGATTTA TACCGGCCCG CTTTTTGTAA AGACTTGGGC TCTTCCCTTG GATAAAAAAA CGGTTCTCCT CGTTGATCCG GGCGGCACGG ATGAGGAATT GATGGAATAC CTAAAAAACA AAAATGCCGA AAGACTCGAA ATTATGCTTA CCCACGGACA TTTTGACCAT GTGGGCGGCG TGCCCGAACT TATGTTAAAA TATCCCGATT CTTCTTTGTG GATTCATCCT GCAGATGCGG GCTATCTGGG CAAAAACGGA AAAGAAAAGC ATATTGCATG TTTTAGCCAA ATCCGTGCAG AAAGATATAT AAAAGCTTTG AAATATGATT TTCCGGAGCC TACTGCTTTG TTAAAAGACG GAGATATTGT AAACGGTTTT AAGGTTTTAT ATACTCCCGG GCATACCGAA GGCTCTGTTT GCTTTTGGAA CGAGGAAGCA AAAGTCCTCT TTTCGGGAGA TACCCTTTTT TACCGCTCCC ATGGAAGAAC AGACCTTTTG GGCGGGGACG ATCAAAAGAT GAAGGCTTCA CTAAAATCTC TTTTAAACCT ACCGGATGAC ACTACCGTTT ATCCCGGGCA CGGTTCCAAT ACTTCGATAG GAGCTGAAAG AGGCTGGATA GAAAAGATTT AG
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Protein sequence | MEITEIYTGP LFVKTWALPL DKKTVLLVDP GGTDEELMEY LKNKNAERLE IMLTHGHFDH VGGVPELMLK YPDSSLWIHP ADAGYLGKNG KEKHIACFSQ IRAERYIKAL KYDFPEPTAL LKDGDIVNGF KVLYTPGHTE GSVCFWNEEA KVLFSGDTLF YRSHGRTDLL GGDDQKMKAS LKSLLNLPDD TTVYPGHGSN TSIGAERGWI EKI
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