Gene TDE2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2388 
SymbolclpP 
ID2740690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2417877 
End bp2418479 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content40% 
IMG OID637161279 
ProductATP-dependent Clp protease proteolytic subunit 
Protein accessionNP_972987 
Protein GI42527889 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTA TAAATGAAAC TAACGAAGAG AAAAAAAATA AAACAAATGA TGACGATGCT 
TTGATGCAAA AATTTCTTAA TACACGCCAG ATTATTTTGG CCGGAGAAAT CAACAAAGAG
CTTTCCGAAA AAATAGTACG CCAACTTTTA CTCATGGAGT CCTTGTCGGC AACAAAGCCT
ATTTATATTT ATATAGATTC CCCCGGGGGA GATGCCGATG CAGGTTTTGC AATCTTCGAT
ATGATAAGAT TTATCAAGGC CCCCGTCTAC ACAATAGGTA TGGGCCTTGT TGCCAGCGCA
GCATCCATCA TACTCCTTGC TGCAAGCAAG GAGCGCCGTT TCGGTATGCC TAACAGCCAC
TACCTTATAC ATCAGCCATT GTCCGGTATA AAGGGAGTTG CAACCGAAAT AGAAATACAC
GCCAAAGAGC TTGAAAAGAT GAGGGTAAAA ATAAATAAAC TCATTGCAGA AGAAACAGGC
ACAGATGAAA AAAAGGTTGC AAAGGATACG GACAGGGATT GCTGGCTAAA TGCAAAAGAA
TCCGTAGAAT ACGGTCTTAT TTCAAAAATA GCTAAAAACC GAAAAGACAT TCCCGAAAAA
TAA
 
Protein sequence
MNFINETNEE KKNKTNDDDA LMQKFLNTRQ IILAGEINKE LSEKIVRQLL LMESLSATKP 
IYIYIDSPGG DADAGFAIFD MIRFIKAPVY TIGMGLVASA ASIILLAASK ERRFGMPNSH
YLIHQPLSGI KGVATEIEIH AKELEKMRVK INKLIAEETG TDEKKVAKDT DRDCWLNAKE
SVEYGLISKI AKNRKDIPEK