Gene TDE2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2374 
Symbol 
ID2739983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2405849 
End bp2406412 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content37% 
IMG OID637161265 
Productprecorrin-8W decarboxylase, putative 
Protein accessionNP_972973 
Protein GI42527875 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0182458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TTAAAGATTC CGAATTTATC AGAGGCGAAG TGCCGATGAC CAAATTCAAC 
ATAAGAAGCC TATCTATCGC TCATCTTCAA ATAGAAAAAG GAGATAAGCT TTTGGATATA 
GGCGGAGGCA CGGGTTCCGT TTCGGTTGAG GCAGCCTTGC AGGGAGCAGA TGTTTTAACA 
GTTGAATTCG ATAAAACGGC TTATGCACTC ATAAAAGAAA ACGCAAAAAA ATTCGGAGTC 
AAAATAAATC TTATTTTAGG GAAAGCACCC GAAGCTCTTT TAGCGGCTGA GTATAAGGAT 
TTACAGTTCG ATAAGTGTTT TATAGGCGGA AGCGGCGGCG AATTAAAAAA TATTTTTGAT 
TATCTGGAAA GCCATTTAAA AAAAGGCGGG ATAATTTGCG CTAATTTTAT TCTTATAAAA 
AATTTAAACG AATTTTTAGA ACTCCTCGAA AAATACGGAT ATACCGAAAT TGAGGCCGAT 
CTTATTCAAA CCGCATCAAT GGGAAGGACC GGTCTTTTTA AGGGAGAAAA TCCCATCTAC 
ATTGTAAGAG CTTGTAAAAG CTAA
 
Protein sequence
MKNIKDSEFI RGEVPMTKFN IRSLSIAHLQ IEKGDKLLDI GGGTGSVSVE AALQGADVLT 
VEFDKTAYAL IKENAKKFGV KINLILGKAP EALLAAEYKD LQFDKCFIGG SGGELKNIFD 
YLESHLKKGG IICANFILIK NLNEFLELLE KYGYTEIEAD LIQTASMGRT GLFKGENPIY 
IVRACKS