Gene TDE2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2373 
Symbol 
ID2739982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2405263 
End bp2405862 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content36% 
IMG OID637161264 
Productprecorrin-6Y C5,15-methyltransferase, putative 
Protein accessionNP_972972 
Protein GI42527874 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000521714 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTAA CGGTCGCCGG GGCAGGACCC GGAAATATAG AACTTTTAAC CCAAGAGGCT 
ATACGTGCAA TCAAAGATGC CGACATAGTT GCAGGCTTTG AGCGTATAGC TTCCGATGTC 
AGGCCGATAA GGAATGACGT AAAAACTCTA AAGGGAATTT CAGAAATTCT TGATCTACCT 
ATAGAGACAA AAAAAGTTTT AGTCCTTGCC TCAGGCGACC CCTGTTTTTT CGGAATTACC 
GAATTCATCA AAAATAAAAA CATAAAAATA GAAAAAGTAA TAACCGGCAT ATCTTCAATG 
CAATATTTTA TGGCTAAAAT TCAAAAACAG TGGCAGACCC TGCCCTTTTA TTCCTTTCAC 
GGAAGAGAAA CAGACTTTAC GGAAATGCAC AGCAAGGATA GCTTTTTTAT TCTTACCGAT 
AAGACAAACA ATCCCGACAT AATTTCGGCA AGACTAAAAG AAGAAGGCTT TAAAGGAAGA 
CTTTTTGTAG GCTATAATCT TTCATATCCG GATGAATCGA TTGAAGAATA TACCATAGGC 
GATAAAATTA TAGTAAAATC TTTTTTAAAT ACGGTATTGG TTCAAAATGA AAAATATTAA
 
Protein sequence
MPLTVAGAGP GNIELLTQEA IRAIKDADIV AGFERIASDV RPIRNDVKTL KGISEILDLP 
IETKKVLVLA SGDPCFFGIT EFIKNKNIKI EKVITGISSM QYFMAKIQKQ WQTLPFYSFH 
GRETDFTEMH SKDSFFILTD KTNNPDIISA RLKEEGFKGR LFVGYNLSYP DESIEEYTIG 
DKIIVKSFLN TVLVQNEKY