| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2355 |
|---|
| Symbol | csrA |
|---|
| ID | 2739964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 2390978 |
|---|
| End bp | 2391205 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637161246 |
|---|
| Product | carbon storage regulator |
|---|
| Protein accession | NP_972954 |
|---|
| Protein GI | 42527856 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
|---|
| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATAC TATCCCGTAA AACAAACCAA AAAATACTTA TCGGAGATGA TATAGAGATT
ACCATAATCG ATATTCGGGG AGATCAGGTA AAAATAGGTG TAGATGCACC GCCTTCGGTC
AAGGTTTTCC GTGAAGAAAT CTACCAAGAA ATTCAAAACG AAAACAGGGC AGCCTTAGTC
CGCGATACCG AGCTTAACCT ACCTGAACTG CATATTAAAA AGAAATAG
|
|---|
| Protein sequence | MLILSRKTNQ KILIGDDIEI TIIDIRGDQV KIGVDAPPSV KVFREEIYQE IQNENRAALV
RDTELNLPEL HIKKK
|
|---|
| |