Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2345 |
Symbol | frr |
ID | 2739440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2382036 |
End bp | 2382593 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637161236 |
Product | ribosome recycling factor |
Protein accession | NP_972944 |
Protein GI | 42527846 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0233] Ribosome recycling factor |
TIGRFAM ID | [TIGR00496] ribosome recycling factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.082368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGAGG AAGTTAAAAA AAATTGTGAA GAAAAAATGA AAAAAACGGT TGTCGCATTA AAAGAAGAAT TCAATATGTT GAGAACCGGA CGAGCATCTT CTGCTCTTTT TGATAAGATA AGAGTAAATT GCTATGGCGA GTCCACTCCT CTTAACCAAC TTGCAAATAT TTCTATCCCT GAAGCAAGGC TTGTAGTGAT TCAGCCCTGG GATAAGGGCT TATTGGTCGA AATCGAAAAG GCTGTTCTGC AGGCTGACCT TTCGGTTAAT CCTACAAATG ACGGAAAGGT TATCCGTATT GCAATTCCGC CGTTGACCGA AGATCGCAGA AAAGACCTTG CAAAAAAGGC AAAGACCATT GCCGAAAATT CGCGGGTTTC AGTGCGTAAT ATCAGACGTG ACGGAATCGA TGAGGCAAAA AAATTACAAA AGGACGGAAA GATAAGCGAA GATCAGTTAA AGACGGCTGA GGACGCTTTC CAAAAATCCA CCGATGCTTA CATTGCCGAA ATAAACAAGG TACTTGAAGC AAAAGAAAAA GAAATAATGG AAAACTAA
|
Protein sequence | MIEEVKKNCE EKMKKTVVAL KEEFNMLRTG RASSALFDKI RVNCYGESTP LNQLANISIP EARLVVIQPW DKGLLVEIEK AVLQADLSVN PTNDGKVIRI AIPPLTEDRR KDLAKKAKTI AENSRVSVRN IRRDGIDEAK KLQKDGKISE DQLKTAEDAF QKSTDAYIAE INKVLEAKEK EIMEN
|
| |