Gene TDE2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2345 
Symbolfrr 
ID2739440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2382036 
End bp2382593 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content40% 
IMG OID637161236 
Productribosome recycling factor 
Protein accessionNP_972944 
Protein GI42527846 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.082368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAGG AAGTTAAAAA AAATTGTGAA GAAAAAATGA AAAAAACGGT TGTCGCATTA 
AAAGAAGAAT TCAATATGTT GAGAACCGGA CGAGCATCTT CTGCTCTTTT TGATAAGATA
AGAGTAAATT GCTATGGCGA GTCCACTCCT CTTAACCAAC TTGCAAATAT TTCTATCCCT
GAAGCAAGGC TTGTAGTGAT TCAGCCCTGG GATAAGGGCT TATTGGTCGA AATCGAAAAG
GCTGTTCTGC AGGCTGACCT TTCGGTTAAT CCTACAAATG ACGGAAAGGT TATCCGTATT
GCAATTCCGC CGTTGACCGA AGATCGCAGA AAAGACCTTG CAAAAAAGGC AAAGACCATT
GCCGAAAATT CGCGGGTTTC AGTGCGTAAT ATCAGACGTG ACGGAATCGA TGAGGCAAAA
AAATTACAAA AGGACGGAAA GATAAGCGAA GATCAGTTAA AGACGGCTGA GGACGCTTTC
CAAAAATCCA CCGATGCTTA CATTGCCGAA ATAAACAAGG TACTTGAAGC AAAAGAAAAA
GAAATAATGG AAAACTAA
 
Protein sequence
MIEEVKKNCE EKMKKTVVAL KEEFNMLRTG RASSALFDKI RVNCYGESTP LNQLANISIP 
EARLVVIQPW DKGLLVEIEK AVLQADLSVN PTNDGKVIRI AIPPLTEDRR KDLAKKAKTI
AENSRVSVRN IRRDGIDEAK KLQKDGKISE DQLKTAEDAF QKSTDAYIAE INKVLEAKEK
EIMEN