Gene TDE2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2333 
Symbol 
ID2739428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2367961 
End bp2368641 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content38% 
IMG OID637161224 
ProductsanA protein, putative 
Protein accessionNP_972932 
Protein GI42527834 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.182308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA AACCCATAAA AAAAATAGCC TTATGCATTA TTTTTCTCTT TGCTTTAATT 
TTAATAGGAA TTGTAAGTAT AAACATCTAC ATGCTTAGCT ATTCAAAACC TTATATTTAT 
AAAAACATTT CCGCCTTGCC GGAAAAATAT GTTGTGATTG TACCCGGAGC TAAGGTATAT 
AAAAACACGG TTTCACATGT TGTGAGGGAT AGGATCGAGG CCGCCGTAAA TTGTTTAAAA 
AACAAAAAAG CTGAAAGAGT TTTGATTTCA GGCGACCACG GAAGAAAGGG TTATGATGAG 
GTAAACAGAA TGCGTATTTT TATGCAGGAT GTTTACGGCA CTGATGAGAA TCTAATCTTT 
ATGGATCATG CTGGTTTTTC TACCTATGAA ACAATGTACC GTGCCCGGGA AATCTTTTGT 
ATTGAAGATG CCGTTGTGGT AACACAGGCC TTCCATACCG CAAGAGCCGT CTACATAGGA 
AGAAAACTAG GCCTCGATGT TATAGCCTAT GAAGCTCCTG AGGTTTTAAG GTACAGCAGG 
GAAACCCGTA TCAGCTGGGA AATAAGAGAA GCTCTAGCAA GGGTAAAAAC CTTCTTTTTG 
GTAATGTTCA ATGTGAAGCC TACATTCCTC GGCAAGAAAA TACCGATAAC TGGAAATGCA 
AAAGACTCAT GGGATTTTTA A
 
Protein sequence
MKSKPIKKIA LCIIFLFALI LIGIVSINIY MLSYSKPYIY KNISALPEKY VVIVPGAKVY 
KNTVSHVVRD RIEAAVNCLK NKKAERVLIS GDHGRKGYDE VNRMRIFMQD VYGTDENLIF 
MDHAGFSTYE TMYRAREIFC IEDAVVVTQA FHTARAVYIG RKLGLDVIAY EAPEVLRYSR 
ETRISWEIRE ALARVKTFFL VMFNVKPTFL GKKIPITGNA KDSWDF