| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2327 |
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| Symbol | clpB |
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| ID | 2739422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2362138 |
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| End bp | 2364717 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637161219 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpB |
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| Protein accession | NP_972927 |
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| Protein GI | 42527829 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAG ATAAGTATAC AGTTAAGGCA TCGGAAGCCG TTCAAGAGGC TTCTTCGCTT
GCCCAAAGAG ACGACCACAG TCAGGTTGAA AGTGAACATC TTTTGTATGT TCTTTTAGAA
CAAGAGGACG GAATTGTTCC GCCTTTAGTA GAAAAAATCG GAGTAAGTCC CGAAAGTCTT
TTGGATGACC TCGATAAAAT GCTTGACAGA AAGCCCCGTG TTACGGGACA GTCCGCTCAA
ACTTATATTT CGCCCTTACT TGCAAAGGTT TTTGCAAATG CCGAAGGCTA TGCAGATAAA
TTAAAAGACG AATATGTTTC TACCGAACAT CTTTTGCTTG CCCTAAGCGA ATCTAAAGAC
GAAACGGGAG AACTCTTGCG CTCACGGGGT ATCAATCTAA AAAATCTCCT TTCCGCACTT
AAAGAAATCC GCGGAAACAA CAGGGTAACG AGCGAAAATC CCGAATCTAC ATTCAGAAGT
TTGGAAAAAT TTTGCCGTGA CCTTACACAG CTTGCAAAAA ACGAAAAGAT AGATCCCGTA
ATCGGGCGGG ATGAAGAAAT AAGGCGGGTA ATGCAGGTTC TTTCCCGTAG AACAAAAAAC
AATCCCGTTT TGATCGGAGA ACCCGGAGTC GGAAAAACAG CCATAGTCGA AGGCCTTGCA
AGGCGTATCG TTTCAGGCGA CGTGCCCGAC AGCTTAAAGG GAAAAAGACT TTTATCCCTC
GACCTCGGAG CCTTGGTCGC AGGAGCAAAA TTCCGCGGCG AATTTGAAGA AAGATTAAAG
GCCGTAATTT CCGAAGTGCA AAAATCCGAA GGCCGAGTCA TCCTCTTTAT CGACGAGCTT
CACACCCTTG TAGGTGCCGG AGCAAGTGAA GGTTCGATGG ATGCTTCAAA CTTATTAAAG
CCGGCCCTTG CCCGAGGAGA GCTCAGGGCG ATAGGAGCCA CTACCCTAAA CGAGTACCGA
AAATACATCG AAAAAGATGC AGCCCTTGAA CGCCGCTTCC AGCAGGTTTA CTGTCCCGAA
CCTACGGTTG AAGACACAAT AGCAATCCTG CGCGGCTTAC AGGAAAAATA TGAAGTTCAT
CACGGGGTAC GCATAAGGGA TGAGGCTCTC ATAGCGGCAG CCGTACTTTC CAACCGTTAT
ATCACAAACC GCTTTTTGCC CGACAAGGCG ATTGACCTTG TAGATGAGGC TGCAAGCCGT
CTTAAAATGG AAATAGAAAG CCAGCCTGTA GAGCTTGATC AGGTTGAGCG CAAAATTCTT
CAGTTGAATA TCGAAAAGGT TTCTATAGGA AAAGAAAACG ATACGGCCTC AAAGGAAAGG
CTTTTAAAAC TTGAAGAAGA GTTGGCGGAG CTTTCTTCAA AACGGAATGC GATGCAGGCC
CAGTGGCAAA ACGAAAAAGC CCGCATTAAC GAATCCCGCA AATACAAGGA AGAATTGGAA
CAGCTCCGTA TCGAAGAAAC CAAGTACAGC CGAGAGGGAA ACTTAAACAA GGCCGCCGAG
CTAAAATACG GAAAAATCCC CGAACTCGAA AAGAAGATAG CTGCCGTTAC TGCCGAGCTT
GAAAAAAAAG CCGGTCAGCA GGGACAGCTT TTACGTGAAG AGGTTTGCGA AGAAGACATA
GCCCGAATCG TTTCAATGTG GACAGGTATT CCCGTTGCAA AAATGCTTGC AAGCGAGATG
CAAAAATTTT TACAGCTTGA AAAAGTTTTA CAAGCCCGCG TCGTCGGACA AGATGAAGCC
GTAAGGGTAG TTTCGGATGC TATAAGAAGA AACAAGGCAG GCCTTTCCGA TATGAACCGT
CCCTTGGGAA GTTTTTTATG TATAGGCCCC ACCGGTGTCG GCAAAACCGA ATTGGCCAGA
ACCCTAGCCG ATTTTTTGTT CAATGACGAA AAGGCCCTTA CCCGAATTGA TATGAGCGAG
TACATGGAAA AACATTCCGT GAGCCGCCTG ATAGGAGCTC CCCCCGGATA TGTGGGTTAT
GATGAGGGAG GGCAGCTTAC CGAGGCCGTA AGACGGAGGC CCTACAGCGT AATCCTCTTT
GACGAAATCG AAAAAGCGCA TCAGGATGTC TTTAACGTCT TTTTGCAGAT TTTGGATGAC
GGGCGTCTTA CCGACGGACA AGGCCGTGTA GTCGATTTTA AGAACACAAT TATAATTATG
ACCAGCAACA TAGGCTCCGA GTATATATTG ACCGCAAAGG ATATGGGAAG CATAAAAGAA
GAAATTAACC AAATTCTCCG CGATAATTTT AGGCCCGAAT TTTTAAACCG CATCGACGAA
ATCCTAACCT TTAACAGGCT TGAAAAAGAA CATATACGAA AGATCGTCGA TATTCAGCTA
AGGTCAGTTG CAGAACGCTT GCAGGCCCGC CGGCTAGGCT TAAAAGTTTC GGATAAGGCG
AAGGATTTTC TTGCAGACAT AGGTTACGAC CCCATGTTCG GTGCCCGCCC CCTAAAGAGG
GCTATACAGG CCGAGCTTGA AAACAAACTC GCCCGCGAAG TTCTCGAAGG TAAATTCCCC
GAAGGAAGCA CAATACTGGT TGACAAGGGA GAAAATAGCC TTATCTTTAA GAAGGGATAA
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| Protein sequence | MNIDKYTVKA SEAVQEASSL AQRDDHSQVE SEHLLYVLLE QEDGIVPPLV EKIGVSPESL
LDDLDKMLDR KPRVTGQSAQ TYISPLLAKV FANAEGYADK LKDEYVSTEH LLLALSESKD
ETGELLRSRG INLKNLLSAL KEIRGNNRVT SENPESTFRS LEKFCRDLTQ LAKNEKIDPV
IGRDEEIRRV MQVLSRRTKN NPVLIGEPGV GKTAIVEGLA RRIVSGDVPD SLKGKRLLSL
DLGALVAGAK FRGEFEERLK AVISEVQKSE GRVILFIDEL HTLVGAGASE GSMDASNLLK
PALARGELRA IGATTLNEYR KYIEKDAALE RRFQQVYCPE PTVEDTIAIL RGLQEKYEVH
HGVRIRDEAL IAAAVLSNRY ITNRFLPDKA IDLVDEAASR LKMEIESQPV ELDQVERKIL
QLNIEKVSIG KENDTASKER LLKLEEELAE LSSKRNAMQA QWQNEKARIN ESRKYKEELE
QLRIEETKYS REGNLNKAAE LKYGKIPELE KKIAAVTAEL EKKAGQQGQL LREEVCEEDI
ARIVSMWTGI PVAKMLASEM QKFLQLEKVL QARVVGQDEA VRVVSDAIRR NKAGLSDMNR
PLGSFLCIGP TGVGKTELAR TLADFLFNDE KALTRIDMSE YMEKHSVSRL IGAPPGYVGY
DEGGQLTEAV RRRPYSVILF DEIEKAHQDV FNVFLQILDD GRLTDGQGRV VDFKNTIIIM
TSNIGSEYIL TAKDMGSIKE EINQILRDNF RPEFLNRIDE ILTFNRLEKE HIRKIVDIQL
RSVAERLQAR RLGLKVSDKA KDFLADIGYD PMFGARPLKR AIQAELENKL AREVLEGKFP
EGSTILVDKG ENSLIFKKG
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