| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2293 |
|---|
| Symbol | |
|---|
| ID | 2740258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2329415 |
|---|
| End bp | 2332660 |
|---|
| Gene Length | 3246 bp |
|---|
| Protein Length | 1081 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637161182 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972893 |
|---|
| Protein GI | 42527795 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1196] Chromosome segregation ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATA TTTTATTCAA TCTTATAACA TTGGTAATTT GTATAGGTAT TATTATTGCT
TTTAGACAAA GCGATAAAAA TAACCGATCC ATCGAAAAAG CAAAAAAATA CGGGGATAAA
ATAAAGGAAG ATCTGGAAGC TTTTGTAAAC GAAAAGAATT CTACTTTAAG CGATCTTTCC
ACGGAATTGG GAGTGCAGCA AAGTAAGGCT ATTGCTACAG TAAAACGGCT TGATGACCTC
CGTGCCATGT TTTTAGAACA AACCGAAACG GTAGAAGCAC GCTCTGCCGC CATTCAGGAT
ATTGATAGAT ATATTACCGA ATCCGGGCAA ACCATTCAAA AACTTATGGA TATGACGGCC
TTGGCAGAAA AAAATTTAAT GGAAATTACA AGGGAAGCGG ATTTTGTAGA TTCTCTTGCA
AAATCGATTA ACGCTGCAAG GGCTCAGCTT AATAATCTCA CCGAAAGTAT TCCGGAATTA
AAACAAAATT TTGCAGCCGA AGCCGATGCC AAATTAAGCG AATATAAAAG CAAAATATTG
GATGAAATGG GCCTTGTAAT CAACGATGTT GAAAACCGCC TTGCCTCGGC CCAAAGAGAT
ACGGGCGAAC TCTTGGAAGT AACATCAATT AAACTTCAAG ACTTATATAA AGAAGCATAT
AATTCTGCAG CAGACAAGGC GGGAGCTCTT CAGGAAGCTG CCTTTGCTAA GTTAAAGGAA
GAAACTGCAG AAAGGGTTCA AAGCTACCGC AAAGAATTTG AAGAAACAGC TGCAGAGATA
GAAACCCAAA TGGATGACAA TTTAAACCGG ACAAGGCAGA TGGCTTCGGA TTTTAAGGCA
GAATGGGAAA CTCAGGCAAA GGACTATCTT GCTCAAATGC AGTCGGATTT TTCCCGGACC
GAAGAAAATA TTTCGTTACG TATAAATTCC ATATCCGAAA AATTGAAGGA AACTGAGGAT
GCCGTTTCGG TACGTTCTGA TGCGATTGCT GCCGATTTAA ACCAAACCGA AGCTACAATG
AGGTCTCAGT TTAACAGCCT TGCTTCTAAC TTCCAAGATA ACGTAAATTC TCTTTCTAAA
TTTACGGATA AAAAGTTAAA TGAGTTTAAG ATTCAGACTG AAGAAAGATT TACCAAATTT
GAAAAGGCTA TTGAAAACGT TGACAGCTTA AAAGAAGAAA TCGAAAAATC TCAAGACCTT
ATTAAAAATG AGATTATAGC CGACTTCTCT TCTTACGTAA ATTCGACCAA ACAAAGTCAG
CAAAACTTTT TTAACGAGTT TACGAATAAT TCGGAAAAAA TCCGTGAACG CATGAAGGCC
ATAGATGCAG GTATCGATGA TCTAAAAGCT AAGGCCTATA CAAACGTTTC GGAAAAATTA
AAAATGTTTG AAGACGACTT CTTTGCAGAC CTTGCAAAGA GGAGCGAGGC TATTAATCTA
AGCTTCGATC AGTGGAAAGA TGATGTTTCT GCCAACATGA CCCTTCTTGC TTCTGAAAAC
GAATCGGCAC GGAAGGATTT GGAAGAAAAA TATAAGGCAG AGCTGCGGGT AAGGCTTGGT
CAGGCAGCCG AAGAATATAA AGCTCTTTTT ACCAAACTGG ATGAAAAGGT TAAAGATGTT
GAAGCCGGTT TAAATTCACG GGTTTCTGCA ATGGACGGCA CTGTAGAGCA GTATATAGAA
TCTTTCCGTG CAGACGTAGA TCAGATAAAA GCAAAGGCAT CTCAGCAGCT TGAAACTGAA
CTTGCCTCAT ATAAGGAGCA GGTTCGAGAG GCTGTATCCA ATCAAAATGC AGAGCTTGAA
AATACTTCAA AGGGCATGCA AGAAAAACTC CTTTCAATTC GGGAAGAATC GGAAGCCAAG
TTTGAAACTA TTAAAAAGGA TTTTGAAACT TGGAAGAACC GCACGGATCA GCAGTTTACG
GATGCCCGTT CATTCTTTGA CGAGAAGATT ACAAACTTTG CCGGCTTAAC GGAAAATGCA
ATTAAAAATC TTGATGCCAA GTATAATGCC CAGTACAAAG ACTTTGTAGC AAAGAGCGGA
GACGCCTTTA ACGGTATTCA GGCGAAGCTT AATTCCGTTG ATACTAAGGT TGCATCTGCA
AACAAGGCCA TTGATGAGCA TGCTTCAGAA GTTACAAACC GCTTTAATAC CGAAGCAGAA
AAACTAAATG AGGTAATCAA TAAAAGAATT AAGGAAGCCG CTTCTGAGGC TGCGCTGTCC
GTACAGGGCA TCAATGATAT GATTCTTGAA GTTCGTAACC GCCTTGATGA AACCCAAGAG
AAGGTTCGCG AAAAGATAGA GGCTGATGCA GACCGCCTAA ATTCGCTTAT AGAAGAAATA
GATAAAAAAC AAAATGACTT TATTACACAA ACCAAGGTCT TTGAAAGGGC TGATGAATTA
AAAGAAGGTT TGGAAAAAGA TATTGCTTCT CTTAAAAATG AGGTTACTAA ATTTGAGGTT
TATAAAAATG CAATGGATGA TCTCACCCTT CAATATGATA AGGTTACTCA TTTGGAAGAG
GAAGCAAAAC AAAAAGTCAG CCGCTTTATG AATGAGCGCA AAAACATTGA GCTTCTTGAA
GGCGAGTTTA TAAAACTTAA TGCTCTTTCC GACTCTATGG ACAAAAAAAT CATCGAGCTT
ACTGCCGTAA ATGATGACTT ACAGCAATAC CAAGTTCAAA TTAGAAGATT GGAAGAAGGT
ATCGGTGATG TAAACACCCG CTATGAAAGG CTTGAGAAAA AAGAAGCCGT ATTAAATCAA
ACTCTTGAAA GCATTGATTC CGCTTTTGAA AATTTAAAGA CTCTTGAATC GGATATTAAA
CAATTTAAAA CTGAGGTAAG TGTAATTCCT CCCGAGATGG AAAAGATAAA GGTAACGCTT
GAAACTCTTT TATCAAATCA GGGAAGGGCA GAAGCTGTTT GCGAAAAGAT TGAGAGCGTC
GATTCTACAT TGGAAGATTT GAACTCCAAG ATGGATAACC TAAAGCAGGC CAGAAGCTGG
CTTGCCGCCA CCGAAACCAG ATTAAAAGAA ATTTCGAGCG AATCGGAAGC TCAGCTAAAG
CTGATGGCAG ATCTCTTTAA GGGAGAAAAA CCCGAAAGGA ACGAAAGCGG AAGTCCGTCA
TTAAATGTGC AAGAAAACGT ACTAAAACTG TCACGCCAAG GTTGGAAAAA CAACGAGATT
GCAAAGGCTT TAAACTTATC CCTCGGCGAA GTAGATCTTA TTCTTGAGTA TGCCGACAAA
AGATAA
|
|---|
| Protein sequence | MNDILFNLIT LVICIGIIIA FRQSDKNNRS IEKAKKYGDK IKEDLEAFVN EKNSTLSDLS
TELGVQQSKA IATVKRLDDL RAMFLEQTET VEARSAAIQD IDRYITESGQ TIQKLMDMTA
LAEKNLMEIT READFVDSLA KSINAARAQL NNLTESIPEL KQNFAAEADA KLSEYKSKIL
DEMGLVINDV ENRLASAQRD TGELLEVTSI KLQDLYKEAY NSAADKAGAL QEAAFAKLKE
ETAERVQSYR KEFEETAAEI ETQMDDNLNR TRQMASDFKA EWETQAKDYL AQMQSDFSRT
EENISLRINS ISEKLKETED AVSVRSDAIA ADLNQTEATM RSQFNSLASN FQDNVNSLSK
FTDKKLNEFK IQTEERFTKF EKAIENVDSL KEEIEKSQDL IKNEIIADFS SYVNSTKQSQ
QNFFNEFTNN SEKIRERMKA IDAGIDDLKA KAYTNVSEKL KMFEDDFFAD LAKRSEAINL
SFDQWKDDVS ANMTLLASEN ESARKDLEEK YKAELRVRLG QAAEEYKALF TKLDEKVKDV
EAGLNSRVSA MDGTVEQYIE SFRADVDQIK AKASQQLETE LASYKEQVRE AVSNQNAELE
NTSKGMQEKL LSIREESEAK FETIKKDFET WKNRTDQQFT DARSFFDEKI TNFAGLTENA
IKNLDAKYNA QYKDFVAKSG DAFNGIQAKL NSVDTKVASA NKAIDEHASE VTNRFNTEAE
KLNEVINKRI KEAASEAALS VQGINDMILE VRNRLDETQE KVREKIEADA DRLNSLIEEI
DKKQNDFITQ TKVFERADEL KEGLEKDIAS LKNEVTKFEV YKNAMDDLTL QYDKVTHLEE
EAKQKVSRFM NERKNIELLE GEFIKLNALS DSMDKKIIEL TAVNDDLQQY QVQIRRLEEG
IGDVNTRYER LEKKEAVLNQ TLESIDSAFE NLKTLESDIK QFKTEVSVIP PEMEKIKVTL
ETLLSNQGRA EAVCEKIESV DSTLEDLNSK MDNLKQARSW LAATETRLKE ISSESEAQLK
LMADLFKGEK PERNESGSPS LNVQENVLKL SRQGWKNNEI AKALNLSLGE VDLILEYADK
R
|
|---|
| |