| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2291 |
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| Symbol | ispD |
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| ID | 2740256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2328230 |
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| End bp | 2328961 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637161180 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | NP_972891 |
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| Protein GI | 42527793 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGACGA TTAAAAGTTT AGGCTTTGCC GCCGTAATAA CTGCAGCAGG CAAATCCCAA
CGAATGAATT TAGATACAAA AAAAGAATAT TTAAGATTAC CTGAATACGG AGAGGGCGTT
ACGGTTCTCT CCGAATGCCT TTTAAAATTT TTACAAACAA AGCTGTTTGA AGTCATAGTT
GTTACTGTTC CTGCCAAAGA TATTTCGGAC GCAAATAATT TAATCTTCAA CGATAAAAGA
ATTGAAAAAG CTCTGCTTAA AAAAAATACA AAAATAATCT TTACGGCAGG TGCCGATACA
AGACAGACTT CCGTCTTTAA AGCCCTTGCT AAACTCGGCG AGCTTAAAGA AAAAAAAGAA
GCCGATTTTA ACTTTGTATT AATCCATGAC GGAGCCCGCC CCTGGGTCAG CCCTGAGCTT
ATAAAACGAG TCTCCGATGA GGTAAGCAAG CGGGAGGCGG TAATCCCCGG CTACCAAGCC
GTTGATACAC AAAAAATCGC CGATAAATCC GGTAAAATAA CCCAACACTT AAAAAGGAGT
TCCGTATATT CGGTACAGAC CCCTCAAGGA TTCGACTTTG AAAAGATACT GGCAGCTCAT
AAACAAGCCC TAGAAAACGG AAAAGAATAT ACAGACGACA GCGAAATTTA TGGAGAATTT
GCCGGAGACG TTTTTATCTG CACGGGAGAA GTATCCAACA AAAAAATAAC TTTTAAGGAA
GATATAAAAT GA
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| Protein sequence | MRTIKSLGFA AVITAAGKSQ RMNLDTKKEY LRLPEYGEGV TVLSECLLKF LQTKLFEVIV
VTVPAKDISD ANNLIFNDKR IEKALLKKNT KIIFTAGADT RQTSVFKALA KLGELKEKKE
ADFNFVLIHD GARPWVSPEL IKRVSDEVSK REAVIPGYQA VDTQKIADKS GKITQHLKRS
SVYSVQTPQG FDFEKILAAH KQALENGKEY TDDSEIYGEF AGDVFICTGE VSNKKITFKE
DIK
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