Gene TDE2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2290 
Symbol 
ID2740255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2327617 
End bp2328243 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content42% 
IMG OID637161179 
Producttranscriptional regulator, putative 
Protein accessionNP_972890 
Protein GI42527792 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA AATTTGTTTT TTCAGCAAAA GAAGTTGTCG TTTACCCGGG TCAGGGCGTC 
GGTACTATCA CGGATATTAC CAAAAAAGAG ATAGCCGGAG AAGTCATTGA CTATTATGTT 
ATTTATCTGT CCGATTCGGA TATGACGGTC TTAGTCCCTA TTACCGGAAT CGATAATCTG 
GGAATAAGGC GTATAGTAAC AAAGGCAGAA GCTGAAGCCG CCCTCAAATT CCTATCCGAA 
GATTTTGAAC CTATCCCGAT AGATTGGAAG GCCCGCTATC AAATGAATAT GGACCTATTT 
AAAAGCGGAA AAATCTTGGA CACAGGCTCG GTCGTACGCT CCCTCTACCA ACGCAGCAAA 
ACAAAGGAGC TTCCCATTCA GGAAAGAAAG CTCTATGACT CAGCCTATAG AATTTTTCAA 
GACGAAATAG CAGCGGCATT AAAGATGACA AAAACCGAAG TAGAGGCAGC TATACACTTA 
CACCTTGAAC CGCTAGGCGG CCCAATCGAA AAATTCAAGG ATGACTATGA CGACGACGAT 
TTAATCGCAA ATGATGATGA AAGACTTGAT GATGACGATA TGGATGAAGA CGACATAGAA 
GACTCGGATA TGTATGAGGA CGATTAA
 
Protein sequence
MSKKFVFSAK EVVVYPGQGV GTITDITKKE IAGEVIDYYV IYLSDSDMTV LVPITGIDNL 
GIRRIVTKAE AEAALKFLSE DFEPIPIDWK ARYQMNMDLF KSGKILDTGS VVRSLYQRSK 
TKELPIQERK LYDSAYRIFQ DEIAAALKMT KTEVEAAIHL HLEPLGGPIE KFKDDYDDDD 
LIANDDERLD DDDMDEDDIE DSDMYEDD