| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2283 |
|---|
| Symbol | |
|---|
| ID | 2740033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2319769 |
|---|
| End bp | 2321007 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637161172 |
|---|
| Product | permease, putative |
|---|
| Protein accession | NP_972883 |
|---|
| Protein GI | 42527785 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.14949 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAG ATTTTATAAA TGCCCTTCAT AATTTTAGAA CAAACAAGAT GCGGACCCTT
CTTTCCTTAT TGGGCATAGT GATTGGCGTT ACCTCGGTTA TAATTGTTAC AAGCCTTGCA
AGTTCTCTTT CAAACAGCAT GATAAAAGAA TTTGAAGAGT TCAGTATGGA TATAATCAAC
ATAGGAACTC AGGCGGATAA TCCCGAATTC GCAGGTGAAG GTAAAATCAT AAAATTTGAT
GAGGCTTTCC GTAAAAAGCT GATGCAAAAA ATCCCCGAGA TAAAGCATGT TTTTTATTCC
AACACTTTTC AAGCCTCAAT TATAAGGAAT GATTTGCGGA TTGAAATTAG CGATATAGAA
GGAATTGAAG CTGAAAGGCT TGAATCTCAC CGAGTGGTTA TGGATTACGG CAGTTTTTTT
TCTTCTTCCG ATTATTCTAC GGGAGCTGAA AAGGCTATTA TAGGCGAAAG GATAGCTTTT
CAGCTTTTTC CCGAGGGCAG GGCTGTAGGT AAATTTATTA CTTTGCAGAT TCCGTCAAGC
AGCGAAAAGT CTCCTCCCCT TATTGTGCGT CTTCAGGTCA TAGGCGTTGT AAAACCCAAA
AATACCTGGG TGATCCGCAC CTCTGATGCC GTCTTTGTTC CAAGAAAATT TGCTCTGAGT
AGGCTTCCGG GAAAGGTATC TGAGGCTGTT TGGGCAGCCG AAGTTGCTAT CTCGGACCCT
AAGGTCTCCT CCAAGGTTGA AGTAAAGATT CAAGATTTTT CTGAAGAACT GTCGGGCGGT
AACCGCTTTG CTCTGTGGGT TTACTCTGCC CGTCAGCAGT TTGAGCAAAT GACTAAGATT
ACAGGAATGG TAAGTCTTGT GCTTTCTGCC ATAGCCGGAA TATCCTTGCT TGTCGGGGGT
ATAGGCATTA TGAATATAAT GCTTGTTACC GTTACCGAGC GCCGAAGGGA GATAGGTATA
AGAAAGGCTC TCGGAGCCAC GGGCGGAGCC ATAAGAATGC AGTTTTTAAT AGAATCGGCT
TCTCTTACTC TTACAGGCGG GCTCATAGGT ATAGTTTTAG GGCTTCTAAT CAGTAAGCTG
ATTGTAAACG TCTTCTTCCC TCCCGAAATA ATCTTTTTAC CCAATTTTTC GGGCTCGCTG
ATAGCCTTTT CGGTAAGCGT ATGTACGGGA ATATTTTTCG GCCTTCATCC TGCTATCAAG
GCTGCAAGGC TTGATCCCGT CCTAGCCCTT GCAGAATAA
|
|---|
| Protein sequence | MFEDFINALH NFRTNKMRTL LSLLGIVIGV TSVIIVTSLA SSLSNSMIKE FEEFSMDIIN
IGTQADNPEF AGEGKIIKFD EAFRKKLMQK IPEIKHVFYS NTFQASIIRN DLRIEISDIE
GIEAERLESH RVVMDYGSFF SSSDYSTGAE KAIIGERIAF QLFPEGRAVG KFITLQIPSS
SEKSPPLIVR LQVIGVVKPK NTWVIRTSDA VFVPRKFALS RLPGKVSEAV WAAEVAISDP
KVSSKVEVKI QDFSEELSGG NRFALWVYSA RQQFEQMTKI TGMVSLVLSA IAGISLLVGG
IGIMNIMLVT VTERRREIGI RKALGATGGA IRMQFLIESA SLTLTGGLIG IVLGLLISKL
IVNVFFPPEI IFLPNFSGSL IAFSVSVCTG IFFGLHPAIK AARLDPVLAL AE
|
|---|
| |