| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2281 |
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| Symbol | |
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| ID | 2740031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2317510 |
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| End bp | 2318583 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637161170 |
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| Product | LysM domain-containing protein |
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| Protein accession | NP_972881 |
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| Protein GI | 42527783 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0169093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAA AAATAGGAAT AAAACTTGCA GACGGGACAT TTTTCCCGAT TTTGGATGAA
AGTGCACTTT CCGAGCAATC TTTGGAATTG ACTACGGTTA GGGATGATCA GGAAAGTGTT
CAAATAAATT TATTTAAACA AGTTGACGGG GCAGAGCCCG AATATATAGG CTCCCTTATT
GTAGAAGATA TTTCAACGGG GCGTGCCGGT GATCCCACTA TAAATTTAAA AATAAAGCTT
GATGAAGAAA AAAATCTTTC TGCAGAAGCC GTCGATGAGG GCTCCGGATC TCATCAATCG
CTAAGAGTAT CTTTAAAAAA TCTTGATGAG GCAAGCCTTG AAGGTATGGA TTTTGATTTT
GCTTCCCTTG ATTCCTCATC CGGGTTTACA AGTGGTGATG ACGATTATTT TATAAAAGAA
AGTGATGATC TTTCGTTTGA TGAATCGCTT GAATCTCAGG CTGATTCTCA ACTTTACGAT
AATGAAGAAA AACCTGAAAA AAAGAAAAAG ATGCCTTTGT GGCTTATAAT TATAATAATA
ATTCTTTGTA TAACAGCCTT GGTATTTGCC ATTCTTCTTT TGACAAAAAA AATGCCCTTT
GCCGATAAAG ATAAGATAGC TTCGGTTCCT GAAAAAGTTG AACAGGTGCA AGAGTCAAAA
AAAGATGTAA ATGCGACAAC CTCTAATGTT CCTAAAGAAA ATACCGCAGA AAAAGCTGCC
GCTGAAGCCA AGCGAAAAGC TGAAGAAGAG GCCAAACAAA AGGCTGAAGC TGAAGCCAAG
AAAAAAGCCG AGGAAGAAGC CAAGCAAAAG GCTGAAGCCC AGGCTAAAAA GAAGGCTGAA
GAAGAAGCTA AACAAAAAGC AGAGGCCAAG AAAAAGGCTG AAACTCAACA AAAATCGAAT
ACAAATTCAA ATGGCGCAGT ACGGTACAAG ATCAAATGGG GAGATACTCT GTGGGATCTA
TCCGAGACCT ATTATAAAAC GCCTTGGCTT TACAAAAAGA TAGCGGATTA CAACAAGATT
AAAAATCCTA ATCTTATTAT AGCAGGAACT TATATAGATA TTCCGCCTAA ATAA
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| Protein sequence | MASKIGIKLA DGTFFPILDE SALSEQSLEL TTVRDDQESV QINLFKQVDG AEPEYIGSLI
VEDISTGRAG DPTINLKIKL DEEKNLSAEA VDEGSGSHQS LRVSLKNLDE ASLEGMDFDF
ASLDSSSGFT SGDDDYFIKE SDDLSFDESL ESQADSQLYD NEEKPEKKKK MPLWLIIIII
ILCITALVFA ILLLTKKMPF ADKDKIASVP EKVEQVQESK KDVNATTSNV PKENTAEKAA
AEAKRKAEEE AKQKAEAEAK KKAEEEAKQK AEAQAKKKAE EEAKQKAEAK KKAETQQKSN
TNSNGAVRYK IKWGDTLWDL SETYYKTPWL YKKIADYNKI KNPNLIIAGT YIDIPPK
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