| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2280 |
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| Symbol | |
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| ID | 2740030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2315382 |
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| End bp | 2317448 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637161169 |
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| Product | Slt family transglycosylase |
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| Protein accession | NP_972880 |
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| Protein GI | 42527782 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGCGTTT GTCTTTGCAG CGTTTCCTGT GCGGGCTCTT ACGATAAAAC GGGAGAAGCC
CGCCTGATTG AGGACCTTTA TTCGGAAAAT TTTTACCGTT TTTTAAAACC TCAAGCTTTG
GAATTGAAGA AGCTGTATAA TACCGATCCT TCATCCTTGT ACTATATAGG TCTTGCCCTC
CAAAAGGCGA AGGTGGGGGC TTCGGATAAA AAAATCTATG ATGCATCGGC TAGGGCTTAT
TTTGAGTACG CAGTAAAAAA TGCTCCCATG CCCTATAAAA AACTGGCCGA TGATGCTCTT
TATTCTCTTT TATCCAATGA AGAAAAACTT AAGCGGCTTG AAGAAAAACT TGCTTTACCC
GAAGCTATTC AATTAGACAA TAAATTAGAC AATCAAACAA TAAGATCCGA AATCCAAAGG
CTGCTATTTT TATCGGGAAA TTTTACAAGA ATGGATCAGT CTTTGCCTGA TTACCTTAAC
ACACAAAAAT TTGATGCGGA AATTATTGAA GGCCTAAAAA ATATCGAAAA AAAGCAGAAT
GAATTAAAAG ACTGCGGAGA CGATTTTTTT AATATTTTAA AAGCAAGAAA GCTAAACTTT
GAATCTCGGT TTGAAGATGC GTGGATTATT TTTAAAAGTT TAATGGAAGC CGGGGATAAT
CCATGCTTTG AACATAGAAT TGTTCTCTCT GATGCGGGAA AGGCTGCCTT AGCAGGCTCC
TCCGACAATG CTGCGGATGC CCTCCTTTTT GAAAATCGGC TTGATTTTTA TGAAAAAAAA
TCCGTAAAAA ATTCCGACTA CATTGTTCAA AAATACATGT ATGCTTTTTA TGCTGCCCGC
CTGCGTCTAA AGATGGGCGG AAAGGAAAAT ACCGAAAAGG CTCTTTTACT TTTTAAAAAG
GCAAAGACCT ATCCGCCCCA ATCCTACGAT TATGATGTTG CCCTTTGGTA CATCCTCGAT
ATAGAAAAAA GCAGATCGTT TAAGGTGTTT TTTGATGAGC TTTGCCTGTC TGTTCCCTCA
TGGAAGAATC CTTCGGTTTA TGAAGAACTG ACAGCTCATG CCTGTATGAA GCTGGTTCTT
TCCCGGGATT GGAAAGGACT TGAAAAACTT CAAAAAGCCG TTCAAAAAAC AAATCTTCTG
ACGGCACGAG CCCGTCTTGC TTATATTCTT GCACGTTCTA AAAAATCATT GGATGCAGAG
TCTCAAAAGC TTTACCGTGA AGCTTATGAA AAAGATCATA ATTCCTTTTA TTACAGGCTT
ATGGCTGCTT ATCAGCTTGG GCTTCCTATT TCCTCTTCTC CATACGGAAA AAATTATAAA
AGAAAAGGCA GCAGCGGCTT TTCGGATGAA GAGACTGTTC GGATTTTAAA AGGTTTTGTA
AAATATAAAC TTTATTCCCA AGTGTACAAT AAAATTACCG TTTTATATCC TCAGATCAGT
ACGGAAGAAG CCGCTTTTTT TTCGCAAGCT TTATCGGAAA ACGGCTATTA TGCCGACTCC
ATGAGAATTA TGACCTTTGC GGTCAACTCC GAAGGTGCCG AATTTGGAGA TGAACACTTA
AAGTTGATTT ATCCCCGTCC TTGGCTTGAG TCGGTTAAAA GATATGCGGC AGAATACAAT
TTACCTGAAT ATCTTTTATA CGCCTTGCTT AGAAGCGAAA GTTATTTTAA GCCTGAGGTT
GTTTCTCATG CGGGTGCGAT AGGACTTGCC CAGCTGATGA AGCCTACTGC TGCCGATATT
GCCCGCCGTC TGAAGCTGGA AACTTATGAC CTTAACAATC CCGATACAAA TATCCGTTTC
GGAGCCTTCT ATCTTTCGGA TATGGTAAAC CGTAACGGCG GAAAAATTAT GCATGCCCTT
TTTTCTTATA ATGCAGGTCC CAATGCAGTC AAACGCTGGG TAAGGCAGGC CGGTGATTTG
CCGACCGACT TATTTTTAGA AAGCCTTGCT TATGCGGAAA CAAGGGGCTA CGGTAGAAAT
GTGCTTGCCG CCGCGATTAT CTACGGGCAT TTATATTACA ATAAAACCTA CCGCGAAATT
ATAAAAGAGC TTTTTCCGGA TATTTAA
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| Protein sequence | MCVCLCSVSC AGSYDKTGEA RLIEDLYSEN FYRFLKPQAL ELKKLYNTDP SSLYYIGLAL
QKAKVGASDK KIYDASARAY FEYAVKNAPM PYKKLADDAL YSLLSNEEKL KRLEEKLALP
EAIQLDNKLD NQTIRSEIQR LLFLSGNFTR MDQSLPDYLN TQKFDAEIIE GLKNIEKKQN
ELKDCGDDFF NILKARKLNF ESRFEDAWII FKSLMEAGDN PCFEHRIVLS DAGKAALAGS
SDNAADALLF ENRLDFYEKK SVKNSDYIVQ KYMYAFYAAR LRLKMGGKEN TEKALLLFKK
AKTYPPQSYD YDVALWYILD IEKSRSFKVF FDELCLSVPS WKNPSVYEEL TAHACMKLVL
SRDWKGLEKL QKAVQKTNLL TARARLAYIL ARSKKSLDAE SQKLYREAYE KDHNSFYYRL
MAAYQLGLPI SSSPYGKNYK RKGSSGFSDE ETVRILKGFV KYKLYSQVYN KITVLYPQIS
TEEAAFFSQA LSENGYYADS MRIMTFAVNS EGAEFGDEHL KLIYPRPWLE SVKRYAAEYN
LPEYLLYALL RSESYFKPEV VSHAGAIGLA QLMKPTAADI ARRLKLETYD LNNPDTNIRF
GAFYLSDMVN RNGGKIMHAL FSYNAGPNAV KRWVRQAGDL PTDLFLESLA YAETRGYGRN
VLAAAIIYGH LYYNKTYREI IKELFPDI
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