Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2277 |
Symbol | |
ID | 2740027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2312820 |
End bp | 2313575 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637161166 |
Product | Sir2 family transcriptional regulator |
Protein accession | NP_972877 |
Protein GI | 42527779 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.256222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAG AAAAAAACGA TTATGACAAA CTTTTTTCGG AAATTACAAA AGCAAGGCAC CTCGTAGCCT TCACGGGAGC CGGAATAAGC ACCCTTGCAG GAATCAAGGA CTTTAGAGGA AAAGACGGCC TTTATAAACA GCCGAACACG GAGAAAATGT TCGATATAGA CGTCTTTTAT CGGGATCCTT CGGTTTATTA CGGAATGGCC AAGGAATTTA TCTACGGATT GGAAGAAAAG CAGCCTGCAA TCGTGCATAC CGTCCTTGCC GACCTTGAAA AAAGGGGCAT CCTAAAAGCC GTAATAACCC AAAACATTGA TTTACTCCAT CAAAAGGCTG GAAGCAAAAA TGTAATTGAG GTACACGGCT CTCCATCGGT TCACTATTGT ATAAACTGCT CTTACACCGA AACCTTTGAA GAAACCGCAA AAACGGCTAA AACGGGAGAA GTACCAAGGT GCCCTAAATG CGGAAGTCCT ATAAAACCGG CAATAACTTT TTTTGGAGAA GCCCTTCCTC AAAAAGCCCT AATGAAGGCA GAAACGGAAG CTTCCAAGTC GGATTTTATG CTGGTTTTAG GTACAAGTCT TTTGGTTTAT CCCGCAGCAG CTCTTCCGGC TTATACTTTA AGAAACGGAG GTAAGATAGC GATAGTAAAC AATCAGCCTA CCCAATTTGA CTCCTATACG GACCTTTTAT TTGAAGATTT GGAAGAAACT TTCGAAGAAA TAGACAAAAG ATTAAAGAAA GTTTAA
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Protein sequence | MDKEKNDYDK LFSEITKARH LVAFTGAGIS TLAGIKDFRG KDGLYKQPNT EKMFDIDVFY RDPSVYYGMA KEFIYGLEEK QPAIVHTVLA DLEKRGILKA VITQNIDLLH QKAGSKNVIE VHGSPSVHYC INCSYTETFE ETAKTAKTGE VPRCPKCGSP IKPAITFFGE ALPQKALMKA ETEASKSDFM LVLGTSLLVY PAAALPAYTL RNGGKIAIVN NQPTQFDSYT DLLFEDLEET FEEIDKRLKK V
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