| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2271 |
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| Symbol | |
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| ID | 2740021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2308571 |
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| End bp | 2309155 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637161160 |
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| Product | HAM1 protein |
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| Protein accession | NP_972871 |
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| Protein GI | 42527773 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000183283 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAT ATCTGGCATC CGGAAATGTA AACAAAAAAA GGGAAGTGCA GGAGCTTCTT
CCGTCTCATA CGATCGTTTT GCCTAAAGAT GAGGGCATAG AATTTGATCC TGAAGAAACG
GGAAGTACTT TTTTTGAAAA TGCTATGATA AAGGCAAAGG CTCTTTACCA TATTGTAAAA
GCTCCTGTTC TTGCAGATGA TTCCGGTCTT TGTGTCGACT TTTTAAACGG AGCTCCCGGT
ATTCATTCCG CACGATACGG TTCTATTGAA GGAGAGCATG TTTCGGCTGA AGCAGGTATT
AACAAGGTCC TTTCAGAATT AAAGGGCGTA AAAGACCGAA GTGCCCGTTT TGCTTGCTGC
ATGGTTTGCC TTTTGGACGA AAACCGTTTT TATTCGGTGC AGGAAACATG TGAAGGTCAT
ATAACCGAAG CTCCGTCAGG TTCGGGCGGT TTCGGCTACG ATCCCATATT CTTTGTAGAA
AAGTTCGGCA AAACCTTTGC CGAACTTACT TCTGAACAAA AAAATTCCAT TTCGCATAGG
GGCAGAGCTC TTTTTTCAAT TTCAAGATTT ATAAAGGGGT CTTAA
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| Protein sequence | MKIYLASGNV NKKREVQELL PSHTIVLPKD EGIEFDPEET GSTFFENAMI KAKALYHIVK
APVLADDSGL CVDFLNGAPG IHSARYGSIE GEHVSAEAGI NKVLSELKGV KDRSARFACC
MVCLLDENRF YSVQETCEGH ITEAPSGSGG FGYDPIFFVE KFGKTFAELT SEQKNSISHR
GRALFSISRF IKGS
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