| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2266 |
|---|
| Symbol | |
|---|
| ID | 2740016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2303132 |
|---|
| End bp | 2304118 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637161155 |
|---|
| Product | reverse transcriptase family protein |
|---|
| Protein accession | NP_972866 |
|---|
| Protein GI | 42527768 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.334675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA AAGGCAATCT ATATCACAAG ATAACCGAAT GGAATAATCT TATCGCCGCT
TTTTATAATG CTTCCCGTGG TAAGAGGTTA AAGCCGGATG TTCTTTTATA TGAAAAAAAT
CTTTATACGA ACTTAAAAAC ATTACAAAAC TATCTTATTA ATCAAACCGT CTTACTCGGC
AGTTATCGGT TCTTCAAAAT ATACGACCCC AAAGAAAGAA TTATCTGTGC AGCTCCGTTT
AATGAACGGG TGCTTCATCA TGCAATTATA AATATCACTG AATCTGTTTT TGAAAAATTC
CAGATTTATG ACAGCTATGC CTGCCGAAAA AATAAAGGAA CACAAGCTGC TTTATTGCGA
GCCCTATATT TTTCACGCCG TTTTAAATAT TTTTTAAAGC TGGATATGAA AAAATACTTT
GACTCCATCC CGCACAGCAA ACTTAGCTTA TTGTTAACCT GTAAGTTTAA GGATAAAGCC
TTGCTGCATT TATTTAATAA ACTGATAGCT TCTTACTCTG TGACGGAAGG ATGGGGGGTA
CCAATCGGCA ATTTAACCAG TCAATATTTT GCAAACTTTT ATCTAAGTTT TTTTGATCAT
TATGCAAAAG AAAAGATGAA TGTAAGAGGA TATATACGCT ATATGGATGA TGTGTTACTT
TTTTCCGATA ATCTTAAAGA TATAAAACTT ATACAAAAAA AAGCAAAAAA CTTTTTAAGC
TGTGAGCTAG ACTTAACATT AAAAGAAGAA ATTATAGGTA TGGTAAAAAA CGGTATCCCT
TTTTTGGGGT TTTTAGTAAA ACCGCAAGGT ATTTATCTTT CACAAAAAAA GAAAAAACGA
TTAAAGAAAA AAATAAAAGA TTATGTTCAT AAATTTAAAA TAGCTTACTG GACCGAGGAA
GAATTTGCTT TACACATTAC TCCCGTATTT GCCCATATTG CAATAAGCCG TTGTAGGGCT
TACTGTAACA AATACCTTTT AACTTGA
|
|---|
| Protein sequence | MKRKGNLYHK ITEWNNLIAA FYNASRGKRL KPDVLLYEKN LYTNLKTLQN YLINQTVLLG
SYRFFKIYDP KERIICAAPF NERVLHHAII NITESVFEKF QIYDSYACRK NKGTQAALLR
ALYFSRRFKY FLKLDMKKYF DSIPHSKLSL LLTCKFKDKA LLHLFNKLIA SYSVTEGWGV
PIGNLTSQYF ANFYLSFFDH YAKEKMNVRG YIRYMDDVLL FSDNLKDIKL IQKKAKNFLS
CELDLTLKEE IIGMVKNGIP FLGFLVKPQG IYLSQKKKKR LKKKIKDYVH KFKIAYWTEE
EFALHITPVF AHIAISRCRA YCNKYLLT
|
|---|
| |