Gene TDE2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2259 
Symbol 
ID2740009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2296617 
End bp2297327 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content47% 
IMG OID637161148 
Producthypothetical protein 
Protein accessionNP_972859 
Protein GI42527761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.245057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAGT ATTGTTTGCG TGAGAATCTT CTCACACCGG ACGAAAACGA CTATATGGCT 
CAAACAGCCG ATGTGCGTTC GTTTTCTTTA GACGAAATCA TTGACCTTAT GATGCAAAAA 
GGTTCGACTC TTACCAAGGC GGACACAAAG GCTGCCTTAC AAGTTTACGG CGAGGTAGTA 
AGTGCCCTTA TCAAAGACGG AGCGGCCGTC AACACACCGC TGATGAATAC CTCTTTAAGC 
ATATCGGGCG TATTTATCGG GGCAACCGAC AGCTTTGACA AAAAACGGCA TTCGGTAAAC 
TTAAATCTTA CGGCAGGACC CGTTCTTAAA GAAGCCTTAA GTAAAATCAA GTGCGAAAAA 
ACCGAAGCGG CGGATACAAA CCCCTACATT ACCGAAGTAA CCGACATAGT AACGGGTAAG 
GTAAACGAGG TACTGACCGC AGGCGGAATC ATACAGCTGG TAGGAAGCCG GCTTAAGTTC 
GATGCCAAAG ATACCGCCCA AGGCATCTTT TTTATTCCCG AAACGGGAGA AGCGGTACAG 
GCAACGGTCA TTGCCGAAAA CAAACCCGCC CGCCTTATGG CAATAATCCC TGCCGATTTG 
GCGGCCGGCA GCTGGTATAT CGAAGTGAGG ACAAAATATG CAAATGCGAC AAAACAGCTT 
AAAACGCTAA AAGCCGGCAG ATTCGGCAAA GCTCTTACCC GTAATTCATA A
 
Protein sequence
MLKYCLRENL LTPDENDYMA QTADVRSFSL DEIIDLMMQK GSTLTKADTK AALQVYGEVV 
SALIKDGAAV NTPLMNTSLS ISGVFIGATD SFDKKRHSVN LNLTAGPVLK EALSKIKCEK 
TEAADTNPYI TEVTDIVTGK VNEVLTAGGI IQLVGSRLKF DAKDTAQGIF FIPETGEAVQ 
ATVIAENKPA RLMAIIPADL AAGSWYIEVR TKYANATKQL KTLKAGRFGK ALTRNS