Gene TDE2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2250 
Symbol 
ID2741355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2288708 
End bp2289469 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content40% 
IMG OID637161139 
Producthypothetical protein 
Protein accessionNP_972850 
Protein GI42527752 
COG category[S] Function unknown 
COG ID[COG2035] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.252828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATACTA AAGCAATGTT AAACTATATA AAGAAGATAA TAGCAGGTAT TGCTATAGGT 
ATAGCAAATG TCATCCCCGG AGTTTCAGGC GGAACCATAG CCGTCGTTTT CGGGGTTTAT
TCCGACCTTA TAGGGGCTGC AAGCCTTGAC ATCAAGATCA TTAAAGCTAA TTTTAAAATT
TATCTTTGCC TTTTCGGAGG CATGGGCTTA GGAATTCTCC TCTTTGCACG CCTTTTCAAA
CTTGTTTATG AAAAGTTTCC CGTGCAGACC AATTTCTTTT TTGTAGGCCT CATTGTGGGA
AGCATCTTTA TAATCTTTGA GCTTGTACGC GAAAAAGAAA AAGAGAGCTC TTTTACAAAG
GTCTTTAAAA TTCTTTGGTT CTTTATAGGT TTAAGCATAA TGCTTGCCCT ATACTTTTTT
AAGGGAGCGG CGGTCTCATC AACTGCGGCC ATAGAAACAT TGAGCCTCGG CAGCTTTATC
TTTTTATTTC TTGCAGGTTT TGCAGGAGCA GCTGCAATGA TAATTCCGGG TATCTCGGGC
TCCTTCCTCC TTTTGATAAT GGGAGCTTAT TACACAGTAA TTAAAGCAAT AACAGATTTT
AATATTCCGG TACTGATTCC TGTAGGCTTA GGTGTTCTAG CCGGCATCAT TCTTTCTGCC
CGTTTAATCG GTTTTTTCAT GGAGAAATTT CCCAAAATAA CCTATGCCTT TATTTTAGGG
CTGGTTGCAG GTTCAATCCG TCACATGATA CCTGACGGCT GA
 
Protein sequence
MYTKAMLNYI KKIIAGIAIG IANVIPGVSG GTIAVVFGVY SDLIGAASLD IKIIKANFKI 
YLCLFGGMGL GILLFARLFK LVYEKFPVQT NFFFVGLIVG SIFIIFELVR EKEKESSFTK
VFKILWFFIG LSIMLALYFF KGAAVSSTAA IETLSLGSFI FLFLAGFAGA AAMIIPGISG
SFLLLIMGAY YTVIKAITDF NIPVLIPVGL GVLAGIILSA RLIGFFMEKF PKITYAFILG
LVAGSIRHMI PDG