Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2250 |
Symbol | |
ID | 2741355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2288708 |
End bp | 2289469 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637161139 |
Product | hypothetical protein |
Protein accession | NP_972850 |
Protein GI | 42527752 |
COG category | [S] Function unknown |
COG ID | [COG2035] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.252828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATACTA AAGCAATGTT AAACTATATA AAGAAGATAA TAGCAGGTAT TGCTATAGGT ATAGCAAATG TCATCCCCGG AGTTTCAGGC GGAACCATAG CCGTCGTTTT CGGGGTTTAT TCCGACCTTA TAGGGGCTGC AAGCCTTGAC ATCAAGATCA TTAAAGCTAA TTTTAAAATT TATCTTTGCC TTTTCGGAGG CATGGGCTTA GGAATTCTCC TCTTTGCACG CCTTTTCAAA CTTGTTTATG AAAAGTTTCC CGTGCAGACC AATTTCTTTT TTGTAGGCCT CATTGTGGGA AGCATCTTTA TAATCTTTGA GCTTGTACGC GAAAAAGAAA AAGAGAGCTC TTTTACAAAG GTCTTTAAAA TTCTTTGGTT CTTTATAGGT TTAAGCATAA TGCTTGCCCT ATACTTTTTT AAGGGAGCGG CGGTCTCATC AACTGCGGCC ATAGAAACAT TGAGCCTCGG CAGCTTTATC TTTTTATTTC TTGCAGGTTT TGCAGGAGCA GCTGCAATGA TAATTCCGGG TATCTCGGGC TCCTTCCTCC TTTTGATAAT GGGAGCTTAT TACACAGTAA TTAAAGCAAT AACAGATTTT AATATTCCGG TACTGATTCC TGTAGGCTTA GGTGTTCTAG CCGGCATCAT TCTTTCTGCC CGTTTAATCG GTTTTTTCAT GGAGAAATTT CCCAAAATAA CCTATGCCTT TATTTTAGGG CTGGTTGCAG GTTCAATCCG TCACATGATA CCTGACGGCT GA
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Protein sequence | MYTKAMLNYI KKIIAGIAIG IANVIPGVSG GTIAVVFGVY SDLIGAASLD IKIIKANFKI YLCLFGGMGL GILLFARLFK LVYEKFPVQT NFFFVGLIVG SIFIIFELVR EKEKESSFTK VFKILWFFIG LSIMLALYFF KGAAVSSTAA IETLSLGSFI FLFLAGFAGA AAMIIPGISG SFLLLIMGAY YTVIKAITDF NIPVLIPVGL GVLAGIILSA RLIGFFMEKF PKITYAFILG LVAGSIRHMI PDG
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