Gene TDE2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2249 
SymbolmraY 
ID2741354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2287588 
End bp2288646 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content40% 
IMG OID637161138 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionNP_972849 
Protein GI42527751 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.131342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATACC ATATTGCAGA ACTGCTTGGC CCCTATTTCG GGCCGATGAG ACTTTTACAA 
TCCTATGCCG TTTTAATTTC TTTAGGCTTG TTTTTGGGCT TTTTAATAAC GGTTTTACTC 
TTGCCTAAAT TTTATTCCAA ATTGCCGAAA GACAGAGGAC GGGAGTTTAC CGTAAATCCC 
GAAGCTGCCG TGGGGAAACC TACGGGGGGC GGAGTGGTAT TTATTTCCAT CTTCGTGCTC 
TGCGTTTTTT TATTGATTAT ACCGACACTT ACACAAGGCC TTGTTTTGGT TATAACCTTT 
GCTGTTATGC TGACAGGTTT TTTAGATGAC AGATCCGAAA AGTCATGGGG AGAATATTTA 
AAGGGCGGCT TGGATTTTAT TTTATCGGCC GTAACAGCCC TTGTTATTTT TTATATCTAT 
TTTGAAGGAA AGGTTTCCTT TTGGCTTCCA TTTATATCAA ACCTTGTCGA AGTACACCCT 
ATTGTTTTCT TTGTCGTTTC AATAATGATT TTGTGGATTT CGATTAACAC AACAAACTGT 
ACTGACGGAG TTGACGGCCT TTCGGGAACC CTTATTCTAT TGGCCCTGGT TTCCCTCGGC 
ATAGTTTTTT ACTTTGTATT GGGACATGTC AAGGTTGCGG CCTATCTTTT GGTTCCCAAT 
ATCAGCACGG GAGCAAAATG GGCAGTTATG ATTTTTACCC TCTGCGGAGT CCTTACGGGC 
TATCTTTGGC ATAATGCCTA TCCGAGTAAG GTACTTATGG GAGATGCCGG TTCCAGAGCT 
TTGGGCTTTT TTATCGGCGT TCTTGTAATT ATTTCACGGA ACCCTTTTAT CCTGTTGATG 
ACGAGCTGCG TTATCCTTAT AAATGGAGGA ACGGGTATTT TAAAAGTGGT TATGCTCCGC 
TTTTTTAAAA TCCGTATTTT TAAAAATATC AGATTTCCTC TTCATGACCA CATGAAAAAG 
AATTTGCAGT GGTCGCCTAC TCAGGTTCTA ATCCGATTTG TGATTGTCCA AATCTTAATT 
ACGATTGTAA TTTTAGGAAT TCTATTTAAG ATTAGATAG
 
Protein sequence
MLYHIAELLG PYFGPMRLLQ SYAVLISLGL FLGFLITVLL LPKFYSKLPK DRGREFTVNP 
EAAVGKPTGG GVVFISIFVL CVFLLIIPTL TQGLVLVITF AVMLTGFLDD RSEKSWGEYL 
KGGLDFILSA VTALVIFYIY FEGKVSFWLP FISNLVEVHP IVFFVVSIMI LWISINTTNC 
TDGVDGLSGT LILLALVSLG IVFYFVLGHV KVAAYLLVPN ISTGAKWAVM IFTLCGVLTG 
YLWHNAYPSK VLMGDAGSRA LGFFIGVLVI ISRNPFILLM TSCVILINGG TGILKVVMLR 
FFKIRIFKNI RFPLHDHMKK NLQWSPTQVL IRFVIVQILI TIVILGILFK IR