| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2245 |
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| Symbol | |
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| ID | 2741350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2284380 |
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| End bp | 2286197 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637161134 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | NP_972845 |
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| Protein GI | 42527747 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.805045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAA AAAAAGCTGT TTACGATGAG TCCAAAATAA AAACTTTGAG CTCCCTTGAA
CACATTCGTT TGAGGACGGG TATGTACATA GGCCGCTTAG GCGACGGCTC AAATCCCGAT
GACGGTATCT ATATCCTCGT AAAAGAGGTT ATAGACAACT CGATAGACGA GTTTATAATG
GGAAACGGCT CGCGCATAGA TATTCAACAA GAAGAAAATA AGATAACGGT CCGCGACTTC
GGGCGAGGCA TCCCTTTAGG AAAATTGGTA GAATGTGTTT CGGTTATAAA CACCGGTGCA
AAATATAACG ATGATGTCTT TCAGTTTTCG GTCGGCTTAA ACGGAGTCGG AACAAAGGCT
GTAAATGCCC TTTCGGAACA TTTTAGGGTT GTAGCCGTGC GGGACGGCAA ATATGCCGAA
GCAATCTTTG AAAGAGGAAA GCTTGTAAGC GAAAAAAGCG GAAACACAAA GCCCGGAATC
AAAAACGGAA CTCTGGTAGA ATTCATTCCC GATACAAAAA TTTTCGGGGA CTATAAATTC
AATTTGGACT TTATCGAAAA ACGGATTTGG AACTATGCCT ATTTAAACTC CGGCCTTACC
TTGAGTTTTA ACGGAAAACT TTTTAAATCC GAAAACGGCC TTTTGGACTT GCTTGAATCC
AATGTAGGAA CTTCAACAAT TTATGAAGTC TGCCGATTTA AGGAAAAACA GCTTGAGTTT
GCTTTTTCGC ATACAAACAA TTACGGCGAA ACCTACTACT CCTTTGTAAA CGGACAATAC
ACTTCCGACG GCGGAACCCA CCTTTCGGCT TTTAAGGAAG GCTTATTAAA AGGTATTAAC
GAGTATTTTA GAAAGAACTA TAAGAGCGAA GACGTAAGGG AGGGGACCTG TGCTGCCGTT
TCGGTAAAGA TTCAAGCTCC CGTCTTCGAA AGCCAGACAA AGAACAAGCT AGGCAACACC
GAGGTGCGCT CTTGGATAGT CAACGATACA AAGTCGGCAG TCGTTGAATG GCTGCAAAAA
AATGCGGACT CTGCCGCAAA ACTTGAAAGC AAGATAATTG CCAACGAAAA ACTCCGCACC
GAGCTCAACA CGGTAAAAAA GGAAGCAAAG GCAGCAGCAA AAAAAATTGC CATAAAGATT
CCGAAATTAA AGGACTGCAA ATTCCATTTA GGAGACGGAA AATTCGGTGA AGATACAATG
ATCTTTATCA CCGAAGGAGA CTCGGCTACG GGAGCCATGG TTTCAAGCAG GGATGTTTTA
ACGCAGGCAA TTTTTTCTCT ACGAGGAAAA CCCGAAAACA TGTACGGCAA AAAACGGGCT
CAGATATATA AAAATGCCGA GCTTTATAAT ATGATGATGG CCCTGGGCAT CGAAAACGAT
ATTGAAGGCT TGCGCTACTC TAAAATCGTA ATCGCAACTG ATGCGGATAA CGACGGCTTT
CATATCCGAA ACCTGCTTTT AACCTTCTTT TTAAGCTATT TTGAAGAGCT GGTTACCTCA
GGGCGGGTTC ATATTTTGGA AACTCCCCTA TTCAGGGTAC GCACCAAAAA AGAGACAAGT
TATTGCTATT CCGAGAAGGA AAGAGATGAG GCTGTAAGCC GCCTTGGGGC TTCTTCCGAA
ATTACCCGCT TTAAGGGCTT GGGAGAAATA AGCCCAAAGG AATTCGGGCA ATTTATCGGG
CAGGATATAA AACTCCTCCC CGTAACGGTT CAAACCCTAA AAAAAGTTCC TTCAATTTTG
GAATTCTACA TGGGCAAAAA CACCCCCGAA CGCCGCAAAT TTATCATGAA AAATCTTCTG
GCCGAGATAG ACGCTTAA
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| Protein sequence | MATKKAVYDE SKIKTLSSLE HIRLRTGMYI GRLGDGSNPD DGIYILVKEV IDNSIDEFIM
GNGSRIDIQQ EENKITVRDF GRGIPLGKLV ECVSVINTGA KYNDDVFQFS VGLNGVGTKA
VNALSEHFRV VAVRDGKYAE AIFERGKLVS EKSGNTKPGI KNGTLVEFIP DTKIFGDYKF
NLDFIEKRIW NYAYLNSGLT LSFNGKLFKS ENGLLDLLES NVGTSTIYEV CRFKEKQLEF
AFSHTNNYGE TYYSFVNGQY TSDGGTHLSA FKEGLLKGIN EYFRKNYKSE DVREGTCAAV
SVKIQAPVFE SQTKNKLGNT EVRSWIVNDT KSAVVEWLQK NADSAAKLES KIIANEKLRT
ELNTVKKEAK AAAKKIAIKI PKLKDCKFHL GDGKFGEDTM IFITEGDSAT GAMVSSRDVL
TQAIFSLRGK PENMYGKKRA QIYKNAELYN MMMALGIEND IEGLRYSKIV IATDADNDGF
HIRNLLLTFF LSYFEELVTS GRVHILETPL FRVRTKKETS YCYSEKERDE AVSRLGASSE
ITRFKGLGEI SPKEFGQFIG QDIKLLPVTV QTLKKVPSIL EFYMGKNTPE RRKFIMKNLL
AEIDA
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