Gene TDE2227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2227 
Symbol 
ID2739503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2266535 
End bp2267194 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content31% 
IMG OID637161116 
Producthypothetical protein 
Protein accessionNP_972827 
Protein GI42527729 
COG category[S] Function unknown 
COG ID[COG4330] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0812019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATT ACTTTAAAAA TATATTCCGA ATTAAAAGTA CCTTTGCCTT GATGTTTTTG 
TCTTTTTTCT GTATTTTTTT ATCGGTATGT AGAATTTTTA TAGCAGAAAA CTATTTTTTA 
CTTTTTTTGG TCTGGAACTT ATTTTTGGCC TTTGTGCCAT GGCTTATATC TTCAACTCTA 
TACCTATCAA AAAACAATAA CAAAATAATT TTTATTGTTT TTATGACTAT CTGGCTTCTG 
TTTTTTCCCA ATGCTCTTTA TATTGTAACA GATTTTATCC ATCTAAAAAC GGCAGCTTCA 
ACAATGCGCT GGTATGATTT AATCCTGTTG TTTTCTTACA GCTTTGCAGG TCTTTTTTAC 
GGCTTCGTAA GTTTGGATTT TATCGAAGCA AAGATGCAAA AGCTTTTTAA TATAAAATAT 
CCGCAAATTT TTTCGATTTT TGCGATATAT CTTTCAGCTT TCGGCATCTA TCTGGGAAGA 
TTTTTAAGGT GGAATTCATG GGATCTTGTA ACGAATTTAA GTTCCGTTCT ATCAGACCTT 
TTTTTGCCGA TAAAGAATCC CTTTATACAT GCAAGAACAT GGGCCTTTAT TCTTTTACTG 
GGAACCCTTT TTAACCTGCT TTATATATCG TACAAGAGCT TTGGCGAGAA AAAAATTTAA
 
Protein sequence
MRHYFKNIFR IKSTFALMFL SFFCIFLSVC RIFIAENYFL LFLVWNLFLA FVPWLISSTL 
YLSKNNNKII FIVFMTIWLL FFPNALYIVT DFIHLKTAAS TMRWYDLILL FSYSFAGLFY 
GFVSLDFIEA KMQKLFNIKY PQIFSIFAIY LSAFGIYLGR FLRWNSWDLV TNLSSVLSDL 
FLPIKNPFIH ARTWAFILLL GTLFNLLYIS YKSFGEKKI