| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2191 |
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| Symbol | pdp |
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| ID | 2740213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2226410 |
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| End bp | 2227741 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637161081 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | NP_972792 |
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| Protein GI | 42527694 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCAA CGGATATTAT TATGAAAAAA CGCGGAATAA AGGGGCAGGC TATAGAGCCC
TTAAACCGCA AAGAGATAGA ATTTATTGTA AATTCTTATG TAAGGGGTGA AATTCCCGAA
TATCAGATTT CGGCATGGCT TATGGCCGTG TATTTTAACG GAATGACCTT TGAAGAAACT
GCTATTCTTA CGGATGTTAT GCTTCATTCC GGGAAGGTGA TGGACCTTTC AAGCCTTGAA
GGCCCCTTTG TCGATAAACA TTCTACCGGA GGGGTAGGGG ATAAGCTCTC GCTTCCTCTT
GCTCCCATTG TTGCGGCAAA CGGTGTTAAG GTTCCAATGA TGAGCGGCCG GGCACTTGGC
CACACGGGAG GAACTCTCGA TAAGCTTGAG GCAGTTACGG GCTACCGCAC CAACTTGACC
GAAGCCGAAT TTAGGAATTT TATAGAAAAA ACAGGCTTTG CCATGACGGG GCAGACAAAG
GAAATCGTTC CTGCAGACCG CCTTCTATAT GCGATGCGGG ATGTTACGGC CACAGTTGAA
TCCGTTCCGC TTATAACTTC GAGTATTCTT TCAAAAAAAG TTGCAGAAGG TTCCGAAGCC
CTCGTTTTTG ATGTAAAATG CGGAAAGGGT GCCTTTATGA AAACCTTGAG CGATGCGAAA
GCCTTGGCGG TAAGCCTTGT AGGTACGGCT AAGGCTATGG GTAAAAAGGC GCGGGCTCTT
ATAACCAATA TGAATGAACC TCTCGGCACG ATGGCCGGAA ACTTTTTGGA AATAGAAGAA
ACGATAGATA TTTTAAAAGG ACAAGGACCC GCGGACAGTA CTGAGCTTAC CTTGCAGCTG
GCCGCTCACA TGCTCGTTCT GGGAGGCAAG GCTAAGACGG AAGAAGAGGG GCTTTCTCTT
GCAAAAGAAG CCGTAAGCTC AGGAAAAGCC TTGGATCTTT TTATAAAAAA TATAGAACTT
CAGGGAGGCA ATCCCAAGAC CCTTATGGCG GAATATAAAA CCCGCCGCAG CAAATTCTTT
GAAGAATTGA AGGCAGAAAG GGACGGCTTT ATCGAGAGCA TTAATGCTTT TGAGGTCGGT
ATGGCCGGTG TAAACCTTGG AGTCGGAAGA AATAAAACCA CCGATCCCGT ATGCCCCGAT
GCCGGAGTTG AAATTTTAAA ACACAAGGGC GATTCCGTAA AAAAAGGAGA CCTTATAATG
AGGGTCTACG GAAAGGATTC GGCTTCGGTT TCCGCTTCAA TGCCCTTATT GAAAAACGCT
ATAGAATATT CCGATAAGGC TCCGCAAAAA AATAAGCTTA TTTTTAAAAT TATCAAACAA
GAAGAACTTT AA
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| Protein sequence | MRATDIIMKK RGIKGQAIEP LNRKEIEFIV NSYVRGEIPE YQISAWLMAV YFNGMTFEET
AILTDVMLHS GKVMDLSSLE GPFVDKHSTG GVGDKLSLPL APIVAANGVK VPMMSGRALG
HTGGTLDKLE AVTGYRTNLT EAEFRNFIEK TGFAMTGQTK EIVPADRLLY AMRDVTATVE
SVPLITSSIL SKKVAEGSEA LVFDVKCGKG AFMKTLSDAK ALAVSLVGTA KAMGKKARAL
ITNMNEPLGT MAGNFLEIEE TIDILKGQGP ADSTELTLQL AAHMLVLGGK AKTEEEGLSL
AKEAVSSGKA LDLFIKNIEL QGGNPKTLMA EYKTRRSKFF EELKAERDGF IESINAFEVG
MAGVNLGVGR NKTTDPVCPD AGVEILKHKG DSVKKGDLIM RVYGKDSASV SASMPLLKNA
IEYSDKAPQK NKLIFKIIKQ EEL
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