| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2190 |
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| Symbol | recJ |
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| ID | 2740212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2224251 |
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| End bp | 2226383 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637161080 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | NP_972791 |
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| Protein GI | 42527693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.887826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGGC AAAAAAAAGA AATAGGCCCC GAACTTGTAA ACGAGATAAA AAGAAAATAC
GGATGTGATC CTCTGACTTC GGCAATATTG GTACGCCGCG GTATTATCGA AGGGAAGGAT
ATTTTATTCT ATTTGGAAGA CGATATGCGC TATCTTCACA GTCCCTTCCT ATTTAAAAAC
ATGGAAGATG CCGTAGACCG TATTCTGGAT GCAAAAGAAG AAGGGGAGAA GGTTTTAATT
TTCGGCGACA GGGATGTGGA CGGCATTACG AGCACGACTC TTCTTTATGA AGCCTTAAAG
GATATGGGGC TTGATGTGTC ATGGCGTATT CCTACCGGAG ATGAGAGCTA TGGGCTTTCC
ATGGAAGCCG TGGAAAAGCA CGCTGCAAAT GACGGCACCC TTATCATAAC GGTGGACTGC
GGTATTTCCA ATTTTAAGGA AATTGAAAAA GCCAATAGTT TAGGTATCGA TGTAATAGTA
GTTGACCACC ATACCCCTCA GGAGAACCTA CCTGAGGCAG CCGTAATAAT AAACTGTAAG
ATGCCCGATT CGGGCTATCC CCACGAAAAT CTATCGGGCT GTGCTACGGC ATGGAAACTT
ATTACCGCAC TTCGTTTCGG TATGCAGCCC TTTTATAAAC AACAAGTTTC CCTTTTAAAT
GTAAGGCCCG TAAATGACGC TTACTCCATA GAAGCCGTAA AACTTGTAAA TATGGTTCAA
ATCGGAAAAA TTACCGAAAC CATAGTTCCG GGAATGCTTT CTTTTTCGGA AACAAGGCTT
GGCTCTTTTT TAAACGGTCA GCAAATATTC GTATGGGATG CTCCCTTACA AAAAAAACAG
CTTAAAAATA TCTTCGGAAA CGGAATCGAA TTTAACTTTT TTGATTTTCA GCCCGAGGTT
GCAAAACAAT TTCCGCAAAT GGGAGATATG AGCCTTTTGC GTTTAAAAGA ATTTTCGACA
ATCGGAAAAT ACTACGAGGA TGCCCAGTCG GAACTCGAAA CCTTTAAAAA TATCTTTATA
ACCTTTATTC AGCAAAAAAA TAATTTTTAC GGAAAAAGAG AGGCTTCCGA AATTCAGCTG
GTTGCCCTTT CGACCCTTGC CGACCTCATG GAATTAACCG GAGAAAACCG TATAATAGTA
AAACAAGGCT TAAAAGAAAT AAACAAAAAG CCCCGCCTCG GTCTTGTAGA CCTGATGGCT
ATGCAAAAAC TTTTAGGGGC TCCCATAGGC ACCGAAGAGA TAGCATGGAA TATCTCGCCA
TTGGTAAATG CCTCCGGCAG AATGGGTAGG CCCGAAACGG CTATCGAGCT TTTTCTTGCT
CAAGATTCGG GCGAAAGAAC GGCTAAGGCC CAAGAAATAT TTCAAATGAA TGAGGACAGA
AGGGCTCTTG GTTCCAAGGC TTGGGAAATT GCCCTGCCTC TTGCGATTGA AAGCTTAAAG
GAATATAACG AAAAATTGGT AGTTGCCGTC AGTGCGGAAT TTCATCGCGG AATTACCGGA
ATTCTTGCAG GAAAGTTGGC AGAATACTTT AAGCTACCGG CCCTTGCTAT CTGCCTGATG
CCTGACGGCA GTGCCGTTGC CTCGATAAGG TCGGCGAGGG GCTTCCGTCT TTTGGACTTC
CTTGAACCCT ATAGCGAGCT TTTTTTGGAC TACGGCGGAC ATGATTTTGC GGCAGGTTTC
GGCATCGAGC AGGAAAAGCT TACGAAGTTT TTGGAAAGTT TAAAACAATT TTCCGGGTCA
ATGGAATTTG AAAATGATGC AGATTCCGAA ACTCTTACAA TTGATGCCGA GCTTCCTCAT
GATTACTTAA AACCCGAAAT CTTACATTTA GTCGATAAAT TTGAGCCTTA CGGATGTAAT
TCTCCGGCTT TGACCTTTAT GACAAAGCGG GTAAAAATTT TAAATGCAAA CATTATAGGC
AAGGCCGAGC CCCTTCATTT GCGCTTTAAC TTGGAGTGCG GGAAATATAA ATGGAATGCT
CTTTATTGGA AGGCTGCCGA AAAACTGGGA ACGGAGTTTA AGGTTGGGGA CTATGCCGAC
ATAGTATTCA ATGTATCGAA AAACTATTTT AACGGTACGG TTACTCCTAA AATGGTTATC
AAGGATTTAA AAAAAATAGA TTATGTGAAC TAA
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| Protein sequence | MDWQKKEIGP ELVNEIKRKY GCDPLTSAIL VRRGIIEGKD ILFYLEDDMR YLHSPFLFKN
MEDAVDRILD AKEEGEKVLI FGDRDVDGIT STTLLYEALK DMGLDVSWRI PTGDESYGLS
MEAVEKHAAN DGTLIITVDC GISNFKEIEK ANSLGIDVIV VDHHTPQENL PEAAVIINCK
MPDSGYPHEN LSGCATAWKL ITALRFGMQP FYKQQVSLLN VRPVNDAYSI EAVKLVNMVQ
IGKITETIVP GMLSFSETRL GSFLNGQQIF VWDAPLQKKQ LKNIFGNGIE FNFFDFQPEV
AKQFPQMGDM SLLRLKEFST IGKYYEDAQS ELETFKNIFI TFIQQKNNFY GKREASEIQL
VALSTLADLM ELTGENRIIV KQGLKEINKK PRLGLVDLMA MQKLLGAPIG TEEIAWNISP
LVNASGRMGR PETAIELFLA QDSGERTAKA QEIFQMNEDR RALGSKAWEI ALPLAIESLK
EYNEKLVVAV SAEFHRGITG ILAGKLAEYF KLPALAICLM PDGSAVASIR SARGFRLLDF
LEPYSELFLD YGGHDFAAGF GIEQEKLTKF LESLKQFSGS MEFENDADSE TLTIDAELPH
DYLKPEILHL VDKFEPYGCN SPALTFMTKR VKILNANIIG KAEPLHLRFN LECGKYKWNA
LYWKAAEKLG TEFKVGDYAD IVFNVSKNYF NGTVTPKMVI KDLKKIDYVN
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