| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2189 |
|---|
| Symbol | |
|---|
| ID | 2740211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 2223288 |
|---|
| End bp | 2224238 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637161079 |
|---|
| Product | M23/M37 peptidase domain-containing protein |
|---|
| Protein accession | NP_972790 |
|---|
| Protein GI | 42527692 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA AAGGAAGTTT TCAAGTATTA TTGTTTTTTT GCTTTTTATT TGCACTCCAT
CCATCGGGAA AGAAGGAAGT TTCCGATATT GAACAAAACG GCAAATCGGA AAAAGCTCTA
TATATTATTT CGCTGCCGGA GAGCGGAGAT TTGGGTTCTT TTTTTAACGT AAAATTTAAG
GCTGCACGCA AAATAGAAAA AGCATGGATT ACTATTTATG ACACATCGGA AAAAAAAGTT
CAAACCATCA ATGCTTTTCC TCTTGATAAG ACGGAAAAAG AATGGGCTGC AATTGCGGCT
GTTGCCGTTT GGTGGAAGAG CGGCAAATGG AAAATTCGGA CTCATCTTAT AATTGACGGA
GCTTTATTTG AGGAAGATAG GGGCTTTGAA GTTTTAGAAA GAGAATTTGA AGAGTATGTA
ATGAAATTGA GCAAAAAAAA TTCACAAATT TTAAGAGATA AGAGTCCTAA AAAAACCGAA
CAGCGAAACA GGTTTGCAGA AGTTTTAAAG GTGCAAAACC TTGAAAGCCT TTATTTTAAG
GGTCTCTTTG CAATGCCTTT TGATGCAAAA AGAATAAGCT CAACTTTTGC CGAAAAGCGC
ACCTCAAAAT ACCCTGACGG AAAAACCTCG GTGAGCCGCC ACTGGGGAAT CGATTATCCT
TCTCCCATAG GAACGCCGAT CTTTGCTCCC GGAACGGGAA AAGTTGTGCT TGCCGAAAAC
AGGATAGTAA CGGGCTGGAC CCTTGTAATA GAACATGCTC CTGCTGTTTA CACCATTTAT
TATCATCTAA ATAAGATTCA CGTAAAAGAA GGTTCTTTGG TAAAACAAGG AGAAAAAATT
GCAGATATAG GAACAACGGG TTTTTCGACA GGCCCCCACC TTCATTGGGA GCTGCGTATA
AATGAAATTC CTGCAGATCC CGAACTTCTT TTAAAAAAAG AATTATTTTA G
|
|---|
| Protein sequence | MLKKGSFQVL LFFCFLFALH PSGKKEVSDI EQNGKSEKAL YIISLPESGD LGSFFNVKFK
AARKIEKAWI TIYDTSEKKV QTINAFPLDK TEKEWAAIAA VAVWWKSGKW KIRTHLIIDG
ALFEEDRGFE VLEREFEEYV MKLSKKNSQI LRDKSPKKTE QRNRFAEVLK VQNLESLYFK
GLFAMPFDAK RISSTFAEKR TSKYPDGKTS VSRHWGIDYP SPIGTPIFAP GTGKVVLAEN
RIVTGWTLVI EHAPAVYTIY YHLNKIHVKE GSLVKQGEKI ADIGTTGFST GPHLHWELRI
NEIPADPELL LKKELF
|
|---|
| |