Gene TDE2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2179 
Symbol 
ID2740201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2209088 
End bp2210674 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content42% 
IMG OID637161069 
Productvoltage-gated chloride channel 
Protein accessionNP_972780 
Protein GI42527682 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA CGGGTTTAAG CACAAAGAAA ATTCTTGAAA ATTGGTACGG CAATCATCTT 
ATTATTACCG GAGAAAGTTT TATAGTGGGA ATCCTCACAG GACTTGCCAT TACGGCATTT
AGAAAATCCA TCGATTTTCT TTCAAGCTTA CGAATTGATG TTTATGATAA GGCAGTAAGC
GGACAGTTCG GTACGGTATT CGGCTTTGGC GTTTTAATTT TGGCGGTAAC GGTTCTGGGG
CTTTTTATGG GCTTTATCAT CAAAAAATAT CCTATGATAA AAGGAAGCGG GGTTTCACAA
ATCAAGGGTA AATTTATGAA AAAGCTCGAT ATGAGTCCAT GGCCGGAATT ACCCTTAAAA
TTTTTAGGCG GTGTTTTAAA CATAAGTGCA GGCCTTTCAG TCGGGCGGGA AGGCCCCTCC
GTTCAAATCG GAGCATACAT AGGAAGTGCC TTTGAAAAAA TCGGCAAGAC TTCCCATATT
GAAAGAGTCT GCCTTGTAAC GAGCGGTGCT GCAGCAGGGC TTGCCGCAAC TTTCGGAGCT
CCCTTTGCAG GAATCGTTTT TGCTATAGAA GACCTGCATC AATATCTAAG CCCACTCCTT
TTAACCTGCG TAATGCTTGG AGCCTTTGCA GGCGACCTTG CAACTTCATT ATTTTTTAAG
CAGGGAGCTA TTTTTGATTT TCACGGTCTT CAACTTTTCC CTATAAAATA TTTCGGCTGG
CTAATTTTGA TGGGGGCTGC GGCAGCCCTG ATCGGGCATC TTTTTAAAAA ATCGATTTAT
ACATCTCAAA AGATGTACAG AAAATTAAAG ATTCCTCCCC AATTTTCGCC ATTGATTCCG
TATCTTATTT CGGTACCTGT CTGTATTTTT TTACCCCTTG CGGCAAGCGG AGGAGATCAT
CTGATTGAAG CCATTGCAGA ACACAGCTTT CCGCTTTCCA TGCTCGTTCT GATTCTTGCG
GCAAAGATAA TTTTTACAGG CCTTTCGGCA GGCTCCGGAG CCATAGGCGG CATATTTGTT
CCACTTCTTT CATGCGGAGC CTTGACGGGA ATTATATTTT CGAACATCTT GGTTTATTTT
AATTTAATTG AAGCTCAATA TGCCGTAAAC CTGATGGTCT TTGCGATGGC CGCCTTTTTT
ACTACCGTAA TAAAGGCTCC GATTACAGCC ATAGTTCTTC TTGCAGAAAC AAGCGGAGAC
CTTTTCCATT TGGGAGGCTT GGTGCTGACC ACGGCAGCTG CATACATTAC GGCAAACATA
ATAAAGTCGC CGCCGAATGA CGAGGTGCTT TTAAAACAAA TTTTAAACAG TGAAGATTTT
GCAAATAAAA AAGAAAAAGC AGAAGATCAC GGCAAGCAGG TTTTTGAAGT ATGCGTTTCT
CCCGAATCTT TTTTGGACGG AAAGAAAATT ATGGACATTC AATGGCCTGA TGACTGTTTA
ATCGTAAGCA TTGCTAGGGG CGAAGAAGAA ATAATCCCTG ACGGCAGTAC CTCTATTTCG
GCTGGCGACA GACTGGTGGT TTTAACTCAA GGACACTATG TCGAATTCCA TTTAGAGCGA
ATTGCAGAGA TGGCTCAAGT CGAGTGA
 
Protein sequence
MKYTGLSTKK ILENWYGNHL IITGESFIVG ILTGLAITAF RKSIDFLSSL RIDVYDKAVS 
GQFGTVFGFG VLILAVTVLG LFMGFIIKKY PMIKGSGVSQ IKGKFMKKLD MSPWPELPLK
FLGGVLNISA GLSVGREGPS VQIGAYIGSA FEKIGKTSHI ERVCLVTSGA AAGLAATFGA
PFAGIVFAIE DLHQYLSPLL LTCVMLGAFA GDLATSLFFK QGAIFDFHGL QLFPIKYFGW
LILMGAAAAL IGHLFKKSIY TSQKMYRKLK IPPQFSPLIP YLISVPVCIF LPLAASGGDH
LIEAIAEHSF PLSMLVLILA AKIIFTGLSA GSGAIGGIFV PLLSCGALTG IIFSNILVYF
NLIEAQYAVN LMVFAMAAFF TTVIKAPITA IVLLAETSGD LFHLGGLVLT TAAAYITANI
IKSPPNDEVL LKQILNSEDF ANKKEKAEDH GKQVFEVCVS PESFLDGKKI MDIQWPDDCL
IVSIARGEEE IIPDGSTSIS AGDRLVVLTQ GHYVEFHLER IAEMAQVE