| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2166 |
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| Symbol | hypA |
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| ID | 2739152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2197833 |
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| End bp | 2198174 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637161056 |
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| Product | hydrogenase nickel insertion protein HypA |
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| Protein accession | NP_972767 |
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| Protein GI | 42527669 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.591448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACGAAT TAAGTTTGGT CATGGAAGTT GTACGCAGGG TTGATGCAAT CGCTAAGTCC
AATAATGTCA GCGAGGTCGA CACAATAGTT TTACAGATCG GCGAAATTGC AACCGTTGTG
CCTCATTTTG TTCAAGCCTG CTATCCTGCT GCCATAGACG GAACATGGAT GGCAGATACA
AAGCTGAAAA TCGAAATGGT AAAGGCTTCA GTCCGATGCA ATAATTGTAA CAAAGTTTTT
GACCCGATAG AATATCACGG CGTATGCCCG GCCTGTTCTT GTGATGAACA TGAGATTCTT
ACAGGACGGG AATTTGTAAT AAAAGAAATT GTGTGTTATT AA
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| Protein sequence | MHELSLVMEV VRRVDAIAKS NNVSEVDTIV LQIGEIATVV PHFVQACYPA AIDGTWMADT
KLKIEMVKAS VRCNNCNKVF DPIEYHGVCP ACSCDEHEIL TGREFVIKEI VCY
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