Gene TDE2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2159 
Symbol 
ID2739145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2193329 
End bp2193934 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content39% 
IMG OID637161049 
Producthypothetical protein 
Protein accessionNP_972760 
Protein GI42527662 
COG category 
COG ID 
TIGRFAM ID[TIGR02185] conserved hypothetical integral membrane protein TIGR02185 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.290916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGT CAAACAAATT TAAAACAAAG GATTTTGTTT TTATCGGAAT AATGACCGTA 
GTTTATATTG CGGTTTTTAT GGTCATAGGT TTTGTTACTG CGGCAATAAA TCCCTTTTTA 
CATGCCTTTT CGCCTGCCAT CACCGGGCTT GTCGTCGGAA CAATTTATTT GTTTTTGGCT 
ATCAAGGTCC CCAAATTCGG TGTCTTTACG ATCAGCCAGC TCTTGCTCAT TATGATTGTT 
TTGATTTTAG GAATGGGATA TCTTCCATGG TTGATAGGTA TGTTTATCGG CGCCTTACTG 
GGCGACATAG CAGCCAATAC CTCAAAGTAT AAGAACAAGT ATACGATAGC CATTGCAAGC 
GGCTTTATAT GCTTGGGAAG TGCTTCAGGA GGCGTTATTC CGGTCCTTTT CTTTGTAGAG 
CATTATAAAA AATTCTGCTT TGAAAGAATG CAGATGAATG AAGCTCAGGT GGAACAAAGC 
ATTGCAGCAA GCGCAGGATA CCTCGGCGTC ATCATCCTAA TTGCGACATT TGTCTTGGGC 
TTTGCAGGAG TTCTTATAGG CTCCAAAATA TTAGGAAAAC ATTTTAAAAA TTCCGGAATA 
AAATAA
 
Protein sequence
MEKSNKFKTK DFVFIGIMTV VYIAVFMVIG FVTAAINPFL HAFSPAITGL VVGTIYLFLA 
IKVPKFGVFT ISQLLLIMIV LILGMGYLPW LIGMFIGALL GDIAANTSKY KNKYTIAIAS 
GFICLGSASG GVIPVLFFVE HYKKFCFERM QMNEAQVEQS IAASAGYLGV IILIATFVLG 
FAGVLIGSKI LGKHFKNSGI K