Gene TDE2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2145 
Symbol 
ID2739131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2181915 
End bp2183015 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content40% 
IMG OID637161035 
Producthypothetical protein 
Protein accessionNP_972746 
Protein GI42527648 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTT TTAAACAATT TTTGAAAAAA ATTAAAAATA TGGATCCTTA TTCTAGGGCA 
AATATATTCT ATTTAATTCT TGCCGTAGCT ATAATAGGCA GTATTCTTTT TTTTACCCGT 
GAAAAAATTA TAAACTATCC TTATGATTCA ATCGAAAATT TTAAGACAAT GATAAGTGTT 
ACAAAGAAGC CTGTCACCGT AATAGGTAAG GGAGATGACG GAGTCTTTTT GGAAGGGCGG 
AGCATAACGT TGAGTCCCTA TAAAATAGGG AAATATGAGG TTGCATTTAG TTTTTGGCAT 
GAGGTATATA ATTGGGCTGT TACCGAAAGC AAACACAAAT ATGTATTTCA GTCTATGGGC 
CAGCCCGGAA TTTTTATGAC ATCAGGTTCT GATCCGGATG ATTTATACGA GATTGCAGAT 
GTTAGAAAAA AAGCCGAATC TTTGGGGCTG CCTTATGAGA CCGTAAAATG CGGTCTTTAT 
CCCGTTACAA AAATGTCATG GAGTGATGCA ATAATCTGGT GTAATGCTCT TAGCGAAAAA 
GAAGGCCTTG ATCCTGTTTA TTTTTATGAC GGACAGGTTT TACGCAGTTC GCTTGAGATA 
ACAAAAACCG AAAACCCTGA AGTGAGGATG AAAAACAACG GGTACCGGTT GCCTACGGAA 
GCCGAATGGG AATTTGCAGC AAGGGGCGGT GATGTGTCTG CTCCCGATTG GGATTTCGGC 
TTTGCCGGTA CCGATGATTT TAATGCCGCT GATGACTATG CATGGCATTC GGGGAACAGC 
TCGTTTTTAA ATGCAGGTGC AATAACCGAA ATTATAGATA TTCATCCTAT CGGTCAAAAA 
AAACCTAACA GGCTGGGGCT CTATGATATG TCCGGTAACT GTTGGGAATG GTGCTTTGAC 
AGATATAATA GCAGGCTGCC CGGAGAATTT ATAGATCCTA TCAATAATAT GGGAGCTCGT 
CCCCGTATTA TAAAAAGCGG TTCTGCAAGA AATCCGCCTG CCTTTGCCCG AGTAAAATCC 
TGGGGCTATG CCACTCCCGT AAATCCGGGA TATATTTTGG GTTTTAGATT AGCCCAAACA 
ATTGTAAAAG ATAATCAATA A
 
Protein sequence
MHFFKQFLKK IKNMDPYSRA NIFYLILAVA IIGSILFFTR EKIINYPYDS IENFKTMISV 
TKKPVTVIGK GDDGVFLEGR SITLSPYKIG KYEVAFSFWH EVYNWAVTES KHKYVFQSMG 
QPGIFMTSGS DPDDLYEIAD VRKKAESLGL PYETVKCGLY PVTKMSWSDA IIWCNALSEK 
EGLDPVYFYD GQVLRSSLEI TKTENPEVRM KNNGYRLPTE AEWEFAARGG DVSAPDWDFG 
FAGTDDFNAA DDYAWHSGNS SFLNAGAITE IIDIHPIGQK KPNRLGLYDM SGNCWEWCFD 
RYNSRLPGEF IDPINNMGAR PRIIKSGSAR NPPAFARVKS WGYATPVNPG YILGFRLAQT 
IVKDNQ