Gene TDE2140 details

Gene Information

• Locus tag: TDE2140
• Symbol: ptrB
• ID: 2739399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2173173
• End bp: 2175230
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637161030
• Product: protease II
• Protein accession: NP_972741
• Protein GI: 42527643
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1770] Protease II

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAACAAT CTGATTTTGA AAAGCCGCCT ATTGCGGAAA TAAAAGAAAC ACGTTTTGAA 
AAGTTTGGGA AAACAAGAAT CGATAATTAT TATTGGTTAA AAGACAAGAC CGATAAAAAA 
GTTATTGACT ACTTAAATGC AGAAAATGCT TATACGGATA AGATAATGGC TTCTTCAAAG 
GATCTGCAAA AATCTATTTA TGATGAAATT GTAGGCCGCA TAAAAGAAGA TGATGAAACC 
TATCCTGTTT TTGAAAACGG ATATTATTAT TACAACCGTG TCGAAAAGGG AAAGCAATAC 
AGAACCTATT GCAGAAAAAA AGCATCTCTT GATGCAGCCG AAGAAATCAT TTTCGATGTA 
AACAAAATGG CGGAAGGAAA ACAAGCCTTT ATCTTCGACG ACTATGTTGT AAGCCCTGAC 
AATAAAAAGG CTTGCTATTT TTATAACGAA ACAGGCTCCT TTGCGGAATT TATTTTAAAG 
ATACGCGATT TGGAAACCGG AAAAGATATA GGCTTCAGCT ATGACGGAGC CGTTACCGCA 
GCTTGGGCAT CCGACAGTAA AACTCTTTTT TACAGTGCAA TCGACAGTAC CCTGCGTTCA 
AGCAAGGTCT TCCGTCAAAA ACTTGATGAA GAAAAGGGTA CTCTTGTCTA TGAAGAAAAA 
GATGTAAAAT ATTCTTGCTA TGTGCATGAA ACAAAGACAA AGGAATTTAT TTTTATTTCA 
AGTTCAAGTT CTACCACCTC CGAAGAGCGT TTTATTTATG CCGATAAGCC TGAAGAAGAA 
TTTAAAATCT TCCTTCCCCG CGTTAAGGAT ACCGAATACT CCGTTTATCC GCACAAGGAA 
AAGTTTTTTA TACGTTACAA GGACAAGCAA AACTTAAACG GCAAAATCTA TTCCGCTCCT 
CGTTCTTCCT ATTCCGATAA ATCTACATGG AAGGAAGAAC GAGCTCACGA CGAAAATGTA 
CGCATTGAGG ATGTGTCCGT ATTTGAATCC TACCTTGTAT TGGAGCTTCG TAAAAACGGC 
CTCATCGAGA TTGAAATTAA ATCGCTTAAA AACGGTGAGG TAAAAAATAT TTCCTTCCCC 
GAACCGGTTT ATACGGCTTA TTTGGGCGCA AACCCGGAAT ACGTTTCCGA TAAGGTACGC 
TATATTTACA CATCCTTAAA CCGCCCGAGC AGCGTATACG ATTACGATAT ACTTACAGGA 
AAATCGGTCT TGTTAAAACA GCAGGAAGTT CCCTCAGGCT TTAATCCAGA TGATTACACT 
GTAGAAAGGC TTTGGGCGAC AGCACAGGAC GGAGTGAAGG TGCCTATGGC TGCCGTTTAC 
AAAAAAGGTT TGGTAAAGGA CGGGTCCTCA CCCGCTCTTC TTTATTCTTA TGGAAGCTAC 
GGCTCCAGCT CCGATGCGTT TTTCAGTCCG AGTGTTTACA GCCTTGTAGA GAGGGGCTTT 
GTTTATGTTG TTGCTCAAAT CAGGGGCGGA AGCGATATGG GAGAAAAGTG GTATGAGGAC 
GGGAAGCTCT TAAAAAAGAA AAATACATTT ACCGATTTTA TTGCTTGTGC CGAGCACCTG 
ATTTCTCAAA AATACACTTC TTCCGATAAG CTCGCAATCA TGGGCGGAAG TGCGGGCGGT 
CTTCTTATGG GTGCTGTTAC AAATATGAGG CCGGATCTTT TCCATTCGGT CGTTGCAGTT 
GTTCCCTTTA TAGATGTCGT TACCACCATG CTCGACGATT CATTACCCCT TACAACGGGC 
GAATATGAAG AGTGGGGAAA CCCGAACGAA GAAGAATATT ATAACTACAT GCTTTCATAT 
TCTCCCTACG ATAATATCGA AGCAAAAAAT TATCCGCACA TTTTTGTAAC GGGCGGCTTA 
AACGATTCGC AAGTTCTTTT CCATGAGCCT GCAAAATATA CGGCAAAGCT GCGTGCAAAG 
AAAACCGGAG ATAATATTCT AATCCTCCGT ATGAATATGG ACTCCGGACA CGGCGGAGCC 
ACAGGCCGCT ATGACAAGAT TAAGGATATA GCCTTTGAAC AAGCCTTTAT TCTTAATATG 
GTAGGAATCA ACAAGTAG 

 

Protein sequence

MKQSDFEKPP IAEIKETRFE KFGKTRIDNY YWLKDKTDKK VIDYLNAENA YTDKIMASSK 
DLQKSIYDEI VGRIKEDDET YPVFENGYYY YNRVEKGKQY RTYCRKKASL DAAEEIIFDV 
NKMAEGKQAF IFDDYVVSPD NKKACYFYNE TGSFAEFILK IRDLETGKDI GFSYDGAVTA 
AWASDSKTLF YSAIDSTLRS SKVFRQKLDE EKGTLVYEEK DVKYSCYVHE TKTKEFIFIS 
SSSSTTSEER FIYADKPEEE FKIFLPRVKD TEYSVYPHKE KFFIRYKDKQ NLNGKIYSAP 
RSSYSDKSTW KEERAHDENV RIEDVSVFES YLVLELRKNG LIEIEIKSLK NGEVKNISFP 
EPVYTAYLGA NPEYVSDKVR YIYTSLNRPS SVYDYDILTG KSVLLKQQEV PSGFNPDDYT 
VERLWATAQD GVKVPMAAVY KKGLVKDGSS PALLYSYGSY GSSSDAFFSP SVYSLVERGF 
VYVVAQIRGG SDMGEKWYED GKLLKKKNTF TDFIACAEHL ISQKYTSSDK LAIMGGSAGG 
LLMGAVTNMR PDLFHSVVAV VPFIDVVTTM LDDSLPLTTG EYEEWGNPNE EEYYNYMLSY 
SPYDNIEAKN YPHIFVTGGL NDSQVLFHEP AKYTAKLRAK KTGDNILILR MNMDSGHGGA 
TGRYDKIKDI AFEQAFILNM VGINK