Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2131 |
Symbol | |
ID | 2739390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 2162180 |
End bp | 2162773 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637161021 |
Product | cobalt transport protein CbiM |
Protein accession | NP_972732 |
Protein GI | 42527634 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATAT CCGATGGAGG ATTATCGACG GCGGTTTGTG CCGTAGGTTA TGCGGCAAGT GCGGTAGGAA TTGCCTTTGC CGTCAAAGGA ACAAAAGAAG AGGATATCCC GAAAATAAGT CTTATGGCGG GAACTTTTTT TGCTATTTCA TTGATTATGA TTCCGATACC GCCGAGCTCG GTTCATCCGC TCATGTGCGG ACTGATAGGA ATTATTGTAG GGCGTAGGGC GCCCCTTGCA TTTTTTCCCG CACTGCTGCT GCAAGCCCTT TTATTTCAAC ACGGCGGGAT TACAACCCTC GGAGCTAACA CTCTGATGCT TTCTATTTCT TCAATATTAT CTGCAATTAT TTTTTATAAT TGGAAAAGCG ATAATGTGCT TTTAAAGGGA ATGGTTGTAG GAGCCTTGTC TGTTATCTTT GTTGTTTTGG TTTTATCGGT TCTTCTTATG ACGGGCGGAA GTTTTGCAAA AGAAACATTT ATAGCTATCT TTGTTTCTCA TTCCGTAGTT ATGGCGGTCG AGGCTGTAAT TACCGGTTTT GCCGTCAAGC TTATGATGAA GGCGAGGCCC GATTGGTTTA AACGGAATTT ATAG
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Protein sequence | MHISDGGLST AVCAVGYAAS AVGIAFAVKG TKEEDIPKIS LMAGTFFAIS LIMIPIPPSS VHPLMCGLIG IIVGRRAPLA FFPALLLQAL LFQHGGITTL GANTLMLSIS SILSAIIFYN WKSDNVLLKG MVVGALSVIF VVLVLSVLLM TGGSFAKETF IAIFVSHSVV MAVEAVITGF AVKLMMKARP DWFKRNL
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