Gene TDE2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2114 
Symbol 
ID2739373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2139480 
End bp2140265 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content33% 
IMG OID637161004 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_972715 
Protein GI42527617 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAG TACAAAACTT AAGTAAATAT TACGGAAGCA AAAAAACTCA GGTTGTAGGT 
TGTAAAAATA TTTCGTTTGA ATTAAAAACC GGTGAGATAA CTTCGCTTTT AGGCTTAAAC
GGTGCGGGTA AAAGCAGTAT CATAAACTGT ATTTCAGGTT ATTATACACC GGATGAAGGA
GATGCTTTTA TAGACTCGTA CTCCATATTA ACCGATGGAC TTGAAGCAAA AAAACTTCTA
GGTATTCTAT ATGAACAAAA TCCTCTTTAT TCGAATATGA CGGTTCATGA TTTTTTATAT
TTCGCCGGTC AAATGCACGG AATAGAAAAA GATAGATTGG ATGCTGCTTT AGATGAAGTA
ATCGATTTTT GCGAAATAGA TGAAGTAAAA AATCACTTAA TTAAAAGTTT ATCTAAGGGG
TTTAAGCAAC GTGTAGGCTT AGCTCAAGCT GTTTTACATA ATCCTCCGTT GATTATTTTG
GATGAACCCG CTTCAGGTTT TGATTCGGTG CAGGTAAAAG ATTTCGAAAA AAAAATATTG
CATATTGCAA AAGAAAAAAC AATTTTAATA TGTACACATG ATTTAAGACA GGCTGCGGAG
CTTTGCTCCA ATCATATTTT ACTTAATAAG GGAGAAATAA TAGCCATTGG TAATCTTTTA
GAAATAAAAG AACAGCTGGA GACGGAAGGC TGCGACTTTG ATTCGGAAAT AAATTATACC
GTATTGGAAA AAGCCTTTGA ATTTTTTGCA GGGATAAACA AAAATGAATT TAGAAAAAAC
GAATAA
 
Protein sequence
MLKVQNLSKY YGSKKTQVVG CKNISFELKT GEITSLLGLN GAGKSSIINC ISGYYTPDEG 
DAFIDSYSIL TDGLEAKKLL GILYEQNPLY SNMTVHDFLY FAGQMHGIEK DRLDAALDEV
IDFCEIDEVK NHLIKSLSKG FKQRVGLAQA VLHNPPLIIL DEPASGFDSV QVKDFEKKIL
HIAKEKTILI CTHDLRQAAE LCSNHILLNK GEIIAIGNLL EIKEQLETEG CDFDSEINYT
VLEKAFEFFA GINKNEFRKN E