| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2109 |
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| Symbol | |
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| ID | 2740348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2133665 |
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| End bp | 2135377 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637160999 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_972710 |
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| Protein GI | 42527612 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATTA CTTTTAAAGA ATTGGGACTT GACGATATAG TCCTGCAAGC AGTTGAAGCC
AAGGGTTTTG AAGAACCTAC TCCTATTCAG GTTTTGGCTA TTCCCCGCCT TCTTTCAGGA
GAAGCAAATG TTATCGCTAA GGCTCGGACA GGAACGGGAA AGACGGCAGC CTTCGGCCTT
CCCCTTGTGC AAGAGCTGCG TTCAAATACC GGAAAGGTGA GAGCCCTTAT TTTGGTTCCT
ACCAGAGAGC TGGCCGTTCA AGTTGCCGGC GAACTTGAAT CTTTTAGAAT AGAAGAATAT
CCCCGTATCG CAACCGTTTA CGGAGGAGCG GCGATAGGCC CTCAACTTAG AAGCCTAAAA
ACAGGTGTCG AAATCGTTGT AGGAACTCCC GGCCGCATAA TGGATCATCT TGAGCGGGGC
TCCCTAAAAA TCGAAGATAT AGAATATTTT ATTTTGGATG AAGCCGATGA GATGCTTAAC
ATGGGCTTTA TCGAAGACAT AGAAAATATC TTTTCAAAGG CAAATCCTGA AGCCCGTGTT
TTAATGTTTT CGGCGACGAT GCCAAAGCAG ATACTGAGCA TAGCTTCAGA CTTTATGGGC
GACTATGAAA TTGTCGAAGA AGAACCTCAA GAAGAAAGAG CTTCTTTAAC GGAACAATTT
TTTTGGGTTG TAAGGGAAGG GGATAAAACC GAAGCCCTTG TCCGTCTTAT AGATACGAGC
CCTAACTTTT ACGGCCTCGT ATTTTGCCAA ACAAAAATCG ATGCCGATGA TGTTGCAAAG
GAACTTGACG AAAGGCACTA CGAAGCTGCC GCCCTCCACG GGGATATTCC TCAAAGCCAA
AGGGAAAAAA TATTGGAACG CTTTAGATCA AAAAAGACCC GCATTCTTGT TGCAACCGAT
GTTGCCGCAA GGGGTATAGA CATCGAGGGA ATTTCCCATG TTGTAAACTA TGCAATTCCT
TATGACGGGC CGACCTATAC CCACCGTATA GGAAGAACGG GCAGGGCAGG AGCGGCAGGG
GTTGCAGTCA GCTTTGTACG CCCTAATGAG GTAAAAAGAA TCGAGTACCT GCGCAAACAT
GCCCGCGGAG AATTAAAAGA AGGCAAAATT CCTTCAATCG AACAAGTCAT CGAAATCAAG
CGTACCCGTA TCTTAAAAGA AACGGCTGCC CAAATCGAAA AACGCATTAG CGAAGAAAAA
CCCGAACAGG GCTTTGCAGC CTTTGCAAAT AAACTCACGG AATACGGAGA TGCTCAAACC
GTTCTCTCCT TTATTCTTCA AATGCAGTAC GGCTCGTTTT TATCGCCTGC TCATTATAAA
ACAATCAAGC CTGTGCGTTC CGAAGGGAAG GCGCGAAAAT CTGATGACGA TTCTTTGCGT
CTTTATATAG GTGTGGGCCG AAAAGACGGC ATCACAAAGC GAAAACTTGC CGAAATGCTA
AGCCGGCTTC TTTCAATCCC CGAACGGCTT GTAGATGATA TAGAGGTTAT GGATAAGTTT
TCCCTTGCTA CTATGCCTAA AAATGCTGCA AATGATGCTC TGCGCCTATG TAAAAAGAAA
AGGGGCTTGC CTCATATGCA TATTGATGTA AAAAGTGAGG CTCCGACTAA TTACGGTTCT
ATCGGTAAGG GAAAAAGAGG ACAAAAACGG AAAAACGGAA CACAAAGAAA AAAAGAAGGT
TTAAGCTCTG CTTCAAAGTA TAAGCGTAAA TAG
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| Protein sequence | MLITFKELGL DDIVLQAVEA KGFEEPTPIQ VLAIPRLLSG EANVIAKART GTGKTAAFGL
PLVQELRSNT GKVRALILVP TRELAVQVAG ELESFRIEEY PRIATVYGGA AIGPQLRSLK
TGVEIVVGTP GRIMDHLERG SLKIEDIEYF ILDEADEMLN MGFIEDIENI FSKANPEARV
LMFSATMPKQ ILSIASDFMG DYEIVEEEPQ EERASLTEQF FWVVREGDKT EALVRLIDTS
PNFYGLVFCQ TKIDADDVAK ELDERHYEAA ALHGDIPQSQ REKILERFRS KKTRILVATD
VAARGIDIEG ISHVVNYAIP YDGPTYTHRI GRTGRAGAAG VAVSFVRPNE VKRIEYLRKH
ARGELKEGKI PSIEQVIEIK RTRILKETAA QIEKRISEEK PEQGFAAFAN KLTEYGDAQT
VLSFILQMQY GSFLSPAHYK TIKPVRSEGK ARKSDDDSLR LYIGVGRKDG ITKRKLAEML
SRLLSIPERL VDDIEVMDKF SLATMPKNAA NDALRLCKKK RGLPHMHIDV KSEAPTNYGS
IGKGKRGQKR KNGTQRKKEG LSSASKYKRK
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