Gene TDE2101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2101 
Symbol 
ID2740340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp2125639 
End bp2126709 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content46% 
IMG OID637160991 
Producthypothetical protein 
Protein accessionNP_972702 
Protein GI42527604 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00076564 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTTTTGTTTT ATTTTTGGCG ATACTTTTTG TATCGGTTTC GGCTTGTAAA 
AACCCGTTTT TTAAAAACAT GCTGGATAAG GATTCGGGGA GTGAAGGGAC CGGAGATTGG 
AATTCTCAAA GTTCCGATGT AGGTTCCTTT GAAGACGCAG GGGACTTTGT AAAAATAATA 
CCTCCTGCAA ACGGCATCGT AGGCGTTGCT CCTAACTACG CCTTACCCGG AAATCATGAT 
TATTGGAAAG GTGTATTTAT TGCAGGGCGC ACGGTAAAAC TGAGCCCCTA TAAGATCGGC 
AAAATGGAGG TAACCTATGA GCTATGGTAT AGTGTACTAA AATGGAATAC TGATAATGGT 
AGGGGATACA TCTTTGCCAA TCAGGGAAGA GAAGGCAGTA ATGGAGGTGA AGGAGTAGCC 
CCCACAGGTG CAAAAAAAGA GCCTGTAACA ATGATAAGCT GGCGAGACTG CATAGTGTGG 
TGTAATGCGT ATACTGAAAA AGAAAAAGGA ATAGGCGAAT GCGTCTACCG CAAAAAGGAC 
AATCATACGG TTGTATTAAA AGATGCGACG GCAACAGCTG CTTGTGATTC AGCCTATGCC 
GATATGAATA AAAAAGGCTT TAGACTTCCG ACGGAAGCCG AGTGGGAATA TGCTGCCCGC 
AGGCAGGGAA GCAATACTGA AAATGCGGCA CAATACGGCG ATGTATGGCT GACCAAATTA 
AACAGTGCAA GCGGAGCCAA AGATAAATGG GATACGGCTG AAACAGGAGA GGTTGCATGG 
TATAAAGGTA ATTCAGGAAA TAAAACTCAT CCGGTAGGAA AAAAGCGGGC AAATGCTCTA 
GGTTTATACG ACATGTCGGG GAATGTCACC GAATGGTGTT TTGATTGGGA TGACACCATA 
GCAGCAGAAA ATGTTACCGA TCCTCAAGGT GCCGCGTCGG GCTCTGCCCG TGTTGAACGC 
GGCGGCAGCT GGCTCAACTA CGCGTACGGC TGCACTGTAG GCGTACGGTA CTGCGTCACT 
CCTGGCAGCA GGAGCGACAA TCTTGGCTTC CGCCTGGCTT GTCGGCCATA G
 
Protein sequence
MKKFFVLFLA ILFVSVSACK NPFFKNMLDK DSGSEGTGDW NSQSSDVGSF EDAGDFVKII 
PPANGIVGVA PNYALPGNHD YWKGVFIAGR TVKLSPYKIG KMEVTYELWY SVLKWNTDNG 
RGYIFANQGR EGSNGGEGVA PTGAKKEPVT MISWRDCIVW CNAYTEKEKG IGECVYRKKD 
NHTVVLKDAT ATAACDSAYA DMNKKGFRLP TEAEWEYAAR RQGSNTENAA QYGDVWLTKL 
NSASGAKDKW DTAETGEVAW YKGNSGNKTH PVGKKRANAL GLYDMSGNVT EWCFDWDDTI 
AAENVTDPQG AASGSARVER GGSWLNYAYG CTVGVRYCVT PGSRSDNLGF RLACRP