| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2089 |
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| Symbol | ffh |
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| ID | 2740328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2116322 |
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| End bp | 2117653 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637160979 |
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| Product | signal recognition particle protein |
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| Protein accession | NP_972690 |
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| Protein GI | 42527592 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00342036 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAAA ATATTACCGA AAAATTCAGC GGGATAATGC GCTCTTTGAG CGGTAAGTCT
AAAATTACCG AAAAAAATAT TGAAGACACA ATCGAAGAAA TAAAAACGGC CCTTTTGGAT
GCCGACGTAA ACTTGCGTGT TGTACGCCGT TTTATAAATG CTACGGCAGA AGAGGCCAAG
GGAGAAAGGG TTTTAAAATC TGTCGATCCC GGGCAGCAGT TTACAAAAAT TGTATACGAT
AAGATGACCT CCTTTTTGGG GGACGAAAAA AAAGCCCTCG ATCTAAGGGG GCCTGACACC
CAATCTGTAA TCCTCTTTTT AGGTCTCCAA GGTTCGGGAA AGACAACCAG TGCCGCAAAA
TTGGCCTTAA AGCTTAAAAA CGAAGGCAGA AAGCCCTTGC TGGTTGCCTG CGACCTTATC
CGCCCTGCCG CCGTAGAGCA GCTTTCCGTT TTAGGCGGAA ACATCAGCGT GCCCGTTTAC
AAAGAAGAAA CGAAAGATGC GGTAAAGGTC GCAAAAAATG CTTTGGCCTT TGCAAAAAAG
AACTTTTATG ACACGGTAAT AGTCGATACG GCGGGACGTC TCCAAATCGA TGAAGACATG
ATGAAGGAAA TCGTCAATAT TAAATCTGCC GTAAAACCTA TGGAAACCAT TCTTGTTGCA
GATTCAATGA CGGGTCAAAG TGCCGTTGAT GTTGCAAAGG AATTTGACGA GCAGGTAGGG
CTTTCAGGCT TAATCCTTAC AAAATTCGAC TCCGACACCA GAGGCGGTGC GGCTCTTTCC
TTAAAGACCA TAACAGGTAA GCCCATTTTT TACATAGGAA CAGGCGAAAA GCTTGAAGAC
CTTGAGCCCT TTTATCCCGA CCGCATTGCA AGCCGTATCT TGGGCATGGG AGACATTGTT
TCTCTTGTCG AAAAGGCCCA AGCTCTTTAT GACGAAGAAG AGGCGGAAAA GCTTCAAAAA
AAGATGCAAA GCGAAAGTTT CAGCCTTGCC GATATGCTCA TGCAGTTGGA GCAGGCCGAA
AAGATGGGGC CTTTAGAGTC AATGCTCGAT ATGATTCCCG GGCTTTCAGG CCAAATAGAT
AAAGATAAGC TGGACCTTTC TCTTTTAAAA CGCCAAAAGG CCATAATTCA ATCGATGACC
TTAAAGGAGA GGGATAATTT CCGTATTATC GGACCGCCTC GCCGTAAACG TATTGCAAAG
GGCTCAGGAA CCTCTGTGGG CGATGTAAAC AAGCTTTTAA AGCAATTTGA AAAGACCCGT
CAAATGATGA GGAAGGTGTC AAAAAACAAG GGATTGCAGG CAAAAATGAT GTCCGGCGGA
CTTTTCGGAT AA
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| Protein sequence | MLENITEKFS GIMRSLSGKS KITEKNIEDT IEEIKTALLD ADVNLRVVRR FINATAEEAK
GERVLKSVDP GQQFTKIVYD KMTSFLGDEK KALDLRGPDT QSVILFLGLQ GSGKTTSAAK
LALKLKNEGR KPLLVACDLI RPAAVEQLSV LGGNISVPVY KEETKDAVKV AKNALAFAKK
NFYDTVIVDT AGRLQIDEDM MKEIVNIKSA VKPMETILVA DSMTGQSAVD VAKEFDEQVG
LSGLILTKFD SDTRGGAALS LKTITGKPIF YIGTGEKLED LEPFYPDRIA SRILGMGDIV
SLVEKAQALY DEEEAEKLQK KMQSESFSLA DMLMQLEQAE KMGPLESMLD MIPGLSGQID
KDKLDLSLLK RQKAIIQSMT LKERDNFRII GPPRRKRIAK GSGTSVGDVN KLLKQFEKTR
QMMRKVSKNK GLQAKMMSGG LFG
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