Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE2081 |
Symbol | |
ID | 2741208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 2111669 |
End bp | 2112589 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637160971 |
Product | hypothetical protein |
Protein accession | NP_972682 |
Protein GI | 42527584 |
COG category | [R] General function prediction only |
COG ID | [COG5401] Spore germination protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.835917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAGA AAAATACATC TTTAGGCTGT TTTTTTTGGC TTGCTTTTAT TTTATTGATA GCCCTGCTCT TTTTTATCAA CAAAGACAAT ATTGCCCGTG TTTTTGAAAA AACAAATGCA ATAAGCATAT TTCAAAAAAA AGAAACGCAA GAAGAAAAGC AAAATGAAGT AGACCTTGAA GGCATTCAAA ACGAAATAGA AAAAATCAGA GCGGCAGAAA AAGATGAGGA AAATTCTTCC GAAGGAAAAG CCGAAGCTGA GCCGGAAAAA CCGGCTGAAC AAGTTCAAAA AACGGTCAAA AAAAATTCGG AACCGCAAAA AACTACAGCT GAGGATAAAC CTAAAGAAGA AAAAAAGACA AGTTCTCAAA ACTCAACCGA AAAAAAGACA AAAACGGAAA CTCAAACCGT CAAAAAAAAC TCTGAAAGCA AAAATAAAGA TGAATCTAAA AAAGATGTGG CTAAACTTGA GCAAAAAAAC GAAAAAGCAT CCGAAAAACG GAGCTCTAAA ATTTATCTGG TTAAAATAGA TTCGGACGGT AAATTGGTAA GAAAGCCGGT TATGAGACAG CTTGAAAAAA CGGACTCGCC TTTAACCGAT GCCATAAACA GCCTTCTTCA AGGCCCCACA ACGGAAGAAG CAAAACAAGG CTTCCGCTCC TTTATTCCTC CCGATACGAA GCTTTTATCG ATTGAGGTAA AAAACGGGGT TGCAGAAGTA AATATAAGCG AAGACTTTCA ATTTAACAGA TACGGTATTG AAGCCTATCA AGCTCAGCTT GAACAAATAG TTTTTACGGC ATGCGAATTT TCCACGGTAA GTTCCGTTCA ATTTTTGATC AAAGGCAAGA AAAAGGAGTA CCTCGGAGCC GAAGGCATAT GGATAGGCTC ACCCCTCTCG GTTAATTCGT TTATAAGATA A
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Protein sequence | MGKKNTSLGC FFWLAFILLI ALLFFINKDN IARVFEKTNA ISIFQKKETQ EEKQNEVDLE GIQNEIEKIR AAEKDEENSS EGKAEAEPEK PAEQVQKTVK KNSEPQKTTA EDKPKEEKKT SSQNSTEKKT KTETQTVKKN SESKNKDESK KDVAKLEQKN EKASEKRSSK IYLVKIDSDG KLVRKPVMRQ LEKTDSPLTD AINSLLQGPT TEEAKQGFRS FIPPDTKLLS IEVKNGVAEV NISEDFQFNR YGIEAYQAQL EQIVFTACEF STVSSVQFLI KGKKKEYLGA EGIWIGSPLS VNSFIR
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