Gene TDE2078 details

Gene Information

• Locus tag: TDE2078
• ID: 2741205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 2106878
• End bp: 2107606
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637160968
• Product: TPR domain-containing protein
• Protein accession: NP_972679
• Protein GI: 42527581

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTTTGG AAGAAAATAA AGATTTGGCA CAGAAAATCA ACGATTTTTT AGCCCAATAT 
AGAAAAATAG TGCTTGGCAT TGTGGTTTGT ATTCTGGTTG CCGTTGCCGG TATTATTGTT 
TGGTTTGTAA TCGGTGAAAA TTCCAAGAAA ACTTCGGTAA CAAGCGTTGA GAAAGTTATT 
TATGAGCTTG AAGACTTTAA ACGGGAAGAT CGGGCTAAAA ATCCTTCATC TGAAGATGAC 
GCCGAGAATA ACGAAAAAAC TGTTTCTGCA GCTGTAAAAG AAGCTGAGGA CAAGGCTATT 
GAAGAATTAA AAACCCTTGG TTCTAAATAT TCTTCTTCCT ATGCGGGCTT TAGGGCAAAT 
ACGACGATAG CCGAAATTTA TTTTCAGCGA AAAATGTATG AAGATGCTTT AAAATTCTAT 
GAACTTGCAG CAAAAGCCGT AAAAAATTCT TATGTAGAAG GAGTTGCCTC TTTTAATGCC 
GCAGCTTGTG CCGATGAGTT AGGAGATAAA GAGAAAGCCC TCGCTTATTA CGAACGAGCC 
TCAAAGGTTG AAAATTTTCC GCTGATTCCC AGGGCGCTTT TTAATACGGG CCGTCTGTAT 
GAAGCCTTGT CAAAAAAAGA AGACGCCATC CTTTCTTATA ATAGGCTTTT GGAAAAATAC 
CCTCAAAATG AATGGGCTCT TCTTGCAAAA TCCCGTATAA TTGTTCTTAA AGGAAACGAT 
AAACAGTAA 

 

Protein sequence

MVLEENKDLA QKINDFLAQY RKIVLGIVVC ILVAVAGIIV WFVIGENSKK TSVTSVEKVI 
YELEDFKRED RAKNPSSEDD AENNEKTVSA AVKEAEDKAI EELKTLGSKY SSSYAGFRAN 
TTIAEIYFQR KMYEDALKFY ELAAKAVKNS YVEGVASFNA AACADELGDK EKALAYYERA 
SKVENFPLIP RALFNTGRLY EALSKKEDAI LSYNRLLEKY PQNEWALLAK SRIIVLKGND 
KQ