| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2075 |
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| Symbol | |
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| ID | 2741202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2101594 |
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| End bp | 2104608 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637160965 |
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| Product | GGDEF domain/EAL domain-containing protein |
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| Protein accession | NP_972676 |
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| Protein GI | 42527578 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GTAAAGATAC TCGAAGATAT TCTACTTCCA TTTTGTCACG CCTTTTGGTT
CCCATGCTTT TTGTATTTGT TCTTCAGGCT GCGGTAATGA TGACGATGTT TTTAAGCTCC
GATATCCTTA AAAAATCCGG CGATAATGCT TATGGAGTTT TAAGTGAAAA GGTTTTAAAC
CGCAAAATGC TTATCGAAAA TGAAATGTCC AATAGGTGGA CAAGAATTAC GGATTTGCAT
GAAAAAGTTT TGAAGGTAAT CCGGGCAGAA TTGTCCCGTA ATAATATTGA GCTTTATCAG
CTTGCAGATA ATCATGACTT GCAAAACAGT ATTCTCGATA CACTTCTGCC TCAGCTTATA
TATACCATAA GACGGAACTA TGTTACGGGT GTCTTTTTGG TTATTGATGC GCCAAGTCCT
ATTGCAAAAA AAGACGAATT TTTTTATCCC GGCTTATATG TAAGAAATGA AGACCCTTCT
TCCTATTCTT TAAGCAATGA GGACATCGTT ATATCGAGAG GTCCGTCAGA GGTTGTGCAA
AATCATAATA TTGCCTTAGG AGTTGATTGG TCTCCTTTCT TTACTATTTC GCCTAACAGC
CGGGATATTT TTTATAGGTA TTTTAATGCG CCTATTGCTG CCGCTCTAGA ATATCCTAAT
GAACCTGCTA AAAATCTTGC TTTTTGGAAT ACTTTATTTA GACCGGATAC TTTAAGTGAT
GAGGTGATTA CATACTCCAT TCCGATAAAG GATGAAAAAG GGAAAATTTA CGGGGTCCTA
GGTATAGATC TTTCGGCAAG ATATATTCAG AGCTTTTTAG ACTTCGATGA GCTTGATATT
TATAAAAAGG GAATGTATTG TATAGCCGTC CATGATGTAG ATAAGAATGC CGGAACTTTT
TTGCCTATAG TTTTTAACAG CATTGCAAGT AATTTGAATG CCGGCCATAT TCCTGCCTTT
GAGGTTGAAC AAACCGACTA TAAAAATGTT TATAGTATCG ATAAGGGTTC AATATTTACG
GAGAGATATT GTTTGGCCAT AGAACCCTTT CATCTTTATC AACGTAACGG AATGTACGAA
AATCAAGAAT GGGTGTTGAT AGGTCTGGCT CCCGAGGCAA GTGTACTTTC ATTTTCGGTA
ACATTAAAGA AAATATTTTG GCAGTCTGTC CTTGTTTCGG GTTTTTTGTT TTTAGCCGGT
TCTTACTTGT CGAGTCAACA TATTTCCAGT ATGTTTACAA AGGTTGTACT AAAGCTGCAA
AACAGTGATC CCAAAAAGAT GCTGAGTATC GAAAAAATGA ATATAGCGGA AATAGATACT
CTGATTGTTG CAATAGAAAA ATTAAGTGCC AGTGTTTTTA ATGCGGCTTC ACGGGTTTCT
ACGATTATAG AAAAGCTTCA GGTTCCTATA GGCGTTTTTG AGCACAATAT CTTGATGGGG
ACCGTTTTTT GCAACTCGAT TTGGTTTAAA TTATTTAATA TTCAAAAATA TTCAGGCGAT
TCCGTTTTGA ATACGGACGA GTTTTATAAA TTGTTGGATC ATTATGAGTA TTATATAAAT
TCAAAGGATG ATACAAAAAC CATCTATGCT ATACCTACAG GGGAACATGG AAAGGTCCGC
TGGATTAGGT TTATGCAGAC GAAGGAAAAC GACAAAATCT TAGGTATAGC ACTCGATATT
ACAAAGGAAG TTGAAGACCG CAAAAAGCTT GAACTTCAAA TGAATTATGA TGAACTTACC
GGCCTCTACA ATAGAGCGGC TTTTGACAGA AAGATAACCG AAGTATTTAA GCAAAAACAT
TTAGGTATCT GTGCCCTTGT TATGTGGGAT CTTGATAACC TAAAATATTT AAACGATTCT
TTCGGACATG CTTATGGAGA TACTCATCTT ATGGCGTTTG GAAAAAAGCT TGCCATGCTG
CAACAAGAGC GCTGTCTTGT TTGCAGGCGC TCAGGGGATG AGTTTTATAG CTTCTTTTAC
ACCTTTTCGA CGCCTGATGA AATTAAGCTT ATTTTGACCG CTTTTTGGAA GGATATACAG
GAGACTCCCA TCACTCTCCC TAATGGAGAG ACGTCAAAGC TCCGAGTCTC GGCCGGCTTA
GCTTGGTATC CTTACGATGC AGATAATCAG GCCGATTTGG TCCGATATGC CGATTTTGCA
ATGTATGACG TAAAACATTC GTTTAAGGGC TCTTTACATG AATTCAATTT GGATGTTTAT
AAAAAGAATT ATATAATGAT CCATGGTACG GAAGCTCTTA ATCAGATGCT TGACAGAAAT
CTTATAGAAT ATGCTTTGCA GCCGATTGTT ACTTCCGGTA CCGGAGATAT TTACGGATAT
GAAATGCTGA TGCGTTCGTC TGCTCCTGAA TTTAAAAGCC CTGAGGATAT ATTGCGTCTT
GCTAAGGCCC AGTCAAAGCT GCATAAACTT GAAGAGCTTA CTTTTTTTGG AGCAATGGAT
ACCTTTGTTA AAAAGATAGA AAGAGGAGAA ATATCTAAAG ATACGAAAAT ATTTTTAAAT
ACTATAAGCT CTCAAGTTTT ATCGGATGCC AAATTCTTCG AATTTGAGGA AAAATTTAAG
CCTTATCTTT CAAATATTGT TTTGGAAATT ACGGAATCCG AGCCTCTTAA CACAAACTTT
TATGATCTAA AAAACGAAAG AATCCGTAAT TGGAATGCAA TGGTTGCAAT TGACGACTTC
GGAAGCGGTT ATAGTAACGA GTCATCTCTT TTATTCTTAT CGCCTAATTT GGTAAAGATA
GATATGTCCA TAGTAAGGGA TGTCCATAAG AGTCTTGATA AGCAAAATGT ATTGGAAAAC
CTTGTTTCAT ATGCAAAGAA AAGAGATATA ATAATATTGG CCGAAGGTGT TGAAACAATA
GATGAGATAG ACGTATTGCT GCGGTTCGGT GTAGACTTGT TCCAAGGTTA CTTTTTTGCA
AAGCCGTCTT TTGATATTAC TCCCATACCC GAAGAAAGAA TACAGGAGTT AAACAGGGTT
TTCTCTTTGT ATTAG
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| Protein sequence | MKKSKDTRRY STSILSRLLV PMLFVFVLQA AVMMTMFLSS DILKKSGDNA YGVLSEKVLN
RKMLIENEMS NRWTRITDLH EKVLKVIRAE LSRNNIELYQ LADNHDLQNS ILDTLLPQLI
YTIRRNYVTG VFLVIDAPSP IAKKDEFFYP GLYVRNEDPS SYSLSNEDIV ISRGPSEVVQ
NHNIALGVDW SPFFTISPNS RDIFYRYFNA PIAAALEYPN EPAKNLAFWN TLFRPDTLSD
EVITYSIPIK DEKGKIYGVL GIDLSARYIQ SFLDFDELDI YKKGMYCIAV HDVDKNAGTF
LPIVFNSIAS NLNAGHIPAF EVEQTDYKNV YSIDKGSIFT ERYCLAIEPF HLYQRNGMYE
NQEWVLIGLA PEASVLSFSV TLKKIFWQSV LVSGFLFLAG SYLSSQHISS MFTKVVLKLQ
NSDPKKMLSI EKMNIAEIDT LIVAIEKLSA SVFNAASRVS TIIEKLQVPI GVFEHNILMG
TVFCNSIWFK LFNIQKYSGD SVLNTDEFYK LLDHYEYYIN SKDDTKTIYA IPTGEHGKVR
WIRFMQTKEN DKILGIALDI TKEVEDRKKL ELQMNYDELT GLYNRAAFDR KITEVFKQKH
LGICALVMWD LDNLKYLNDS FGHAYGDTHL MAFGKKLAML QQERCLVCRR SGDEFYSFFY
TFSTPDEIKL ILTAFWKDIQ ETPITLPNGE TSKLRVSAGL AWYPYDADNQ ADLVRYADFA
MYDVKHSFKG SLHEFNLDVY KKNYIMIHGT EALNQMLDRN LIEYALQPIV TSGTGDIYGY
EMLMRSSAPE FKSPEDILRL AKAQSKLHKL EELTFFGAMD TFVKKIERGE ISKDTKIFLN
TISSQVLSDA KFFEFEEKFK PYLSNIVLEI TESEPLNTNF YDLKNERIRN WNAMVAIDDF
GSGYSNESSL LFLSPNLVKI DMSIVRDVHK SLDKQNVLEN LVSYAKKRDI IILAEGVETI
DEIDVLLRFG VDLFQGYFFA KPSFDITPIP EERIQELNRV FSLY
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