Gene TDE2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2053 
Symbol 
ID2740647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp2081779 
End bp2082213 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content39% 
IMG OID637160944 
ProductNifU domain-containing protein 
Protein accessionNP_972655 
Protein GI42527557 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.415003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATAG ATACGATTTA TCAGGAAATG ATTCTAGAAT ACTCCCGAAA AAAAGAAAAC 
TGCCGCGAAC TTTCCGGCGA AGGAGTAAAG ATAGAAAGAG GCCATAACCC CTCATGCGGT 
GATGACCTTA CCCTGCTTAT CCGGGAAAAA GACGGAATCA TAGAAGATGC TTCTTTTTTA 
GGAAGGGGCT GCGCCATTTC TACGGCTTCT ACAAATATGC TGATTGAACT TATAAAAGGA 
AAAAATGCCG AAGAAGGAAA ACGCAAGGTA GAAATATTTT TTAAGATGAT GAACGGAAAA 
GAAATTTCGG AAGAAGAAAA GGAAGAATTG GAAGATGCTC AAATCTTGGA ATATTTTGCC 
GAAATGCCGG CACGTATAAA ATGTGCAACT TTAAGCTGGC ACAGTGCCGA TGTTCTTTTA 
AACGAAAAAA AATGA
 
Protein sequence
MDIDTIYQEM ILEYSRKKEN CRELSGEGVK IERGHNPSCG DDLTLLIREK DGIIEDASFL 
GRGCAISTAS TNMLIELIKG KNAEEGKRKV EIFFKMMNGK EISEEEKEEL EDAQILEYFA 
EMPARIKCAT LSWHSADVLL NEKK