| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2029 |
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| Symbol | |
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| ID | 2740376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2057238 |
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| End bp | 2058092 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637160919 |
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| Product | TatD family hydrolase |
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| Protein accession | NP_972632 |
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| Protein GI | 42527534 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000225222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGCA AATTCAGGTT TGCCATGGAT ATAGGTACTC AACCGGCAGA TTTAAAAGAA
AGACAAAAAT TTATTTCGGA TATTTTTGAA GGTAAAATAC AAGGGCAAGA GACCGTGCAT
TTGCCTGAGC GTTTCCCCGA TTTTATGCAT TTTGCGGCGG GACTTTGGCC CCATGCCGAA
AGCATTGCCG AGCCTGAAAA GGCTCTTGCG GCCTTAAAAA CCGATATCGA TACTCTTTTT
TTACAAAAAG CCGAAGCGGA AAAGACTAAT CCGGGTAAGC CCTTTTATTG CGGCCTTGGA
GAATGCGGAC TTGACCGTTA TTGGAACGGC CCTGCTGCCG AAAAAAGGGG AGCGGGTAGC
CAAGCTGATG ATGAAAAAGG CACAAGCGAT ATAGAAGGGG AGGAGTTTCT TTTTAAAGAG
CAGTTAAAAA TTGCAAAAGA AAAAAATCTT TCAGTGATAG TTCATTCAAG GGATGCTTAT
GAAGATACCC TAAAATGTAT TGATGAGGTA GGCTATCACA AGGGAATAAT CCACTGCTAT
TCTTACGGGC TTAAAGAGGC ATATTCCTTT TTGGAAAGGG GTTGGTATAT TTCCTTTCCC
GGAAACATAA CCTACGCTAA AAAGCAGGCC GATAGGGATA GGATTGCAGA GCTTGTAAGG
GCGATTCATG CCGATAAGCT CTTGCTTGAA ACGGATGCCC CGTATTTAGC TCCCGTTCCT
TTTAGGGGAA AGATAAATAC TCCTCTTTTA ATAGAATACA CCTATGCCGC CGTTTCCGAA
ATTTTAGATA AATCCATGGA AGCTTTGGCA GAACAAATTT ATCAAAACTG CTGTTCTTGT
TTTTTGGTAA AGTAG
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| Protein sequence | MERKFRFAMD IGTQPADLKE RQKFISDIFE GKIQGQETVH LPERFPDFMH FAAGLWPHAE
SIAEPEKALA ALKTDIDTLF LQKAEAEKTN PGKPFYCGLG ECGLDRYWNG PAAEKRGAGS
QADDEKGTSD IEGEEFLFKE QLKIAKEKNL SVIVHSRDAY EDTLKCIDEV GYHKGIIHCY
SYGLKEAYSF LERGWYISFP GNITYAKKQA DRDRIAELVR AIHADKLLLE TDAPYLAPVP
FRGKINTPLL IEYTYAAVSE ILDKSMEALA EQIYQNCCSC FLVK
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