| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2001 |
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| Symbol | |
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| ID | 2740454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 2019865 |
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| End bp | 2021658 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160891 |
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| Product | oligoendopeptidase F, putative |
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| Protein accession | NP_972604 |
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| Protein GI | 42527506 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0875927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACA AAACTGCACC GAGATGGGAT TTAAAAAATA TTTATCCCGA TTTTAAATCA
AAAGAATATG CGGAATCAAA AAAGAAAATT CCTGCATTGA CTTCCAAGTT TGAAAAACAC
TTAAAGGCTT TTTCGGATAA GGACTTAAAA AAATGGCTGG TAAAAGCTTT GGACATTTTA
AACGAGTTTA ATGCCGAAGC CGAAACTCTT TATGCCTATG CTTCGGCCGT GTATACAACC
GATACCGAAA ACAAGGAAGC TTTATCTGAG CTTAACTCGA TATCGGCTCT CTTTGTTCCG
TTTACGCCCC TTGGAGTGCG CTTTTCGAAT ATCTTGGCTT CCGTTTCCAA AGAGGTAAAG
GCCTTGATTA AAAACGACAA GGATTTAAAA TATGCTTCTT TCTATTTGGA AGATACCTTG
TTTTGGCAAA AAAAACAGAT GAGCGAAGAA GAGGAATCCT TGGCTGCCGA TCTAGCCCGC
TCCGGTGCTT CGGCTTGGAG CAAATTACAG AGCACAATGA CTTCAACAGC TTCATGTATT
TGGGATGAAA AAACTAAGGA AGAAAAAACC TTGGTTCAGC TTAGAGCGAT GGCCTACGAT
AAGGATGCGG CCGTCCGCGA AAAGGCTTTT AAAAAAGAAC TTGAGCTTTG CAAGTCCATC
GAAAAACCCG TTGCCGCAGC CTTGAACGGC GTAAAGGGAA CTTCCATCAC CTTAAATAAA
AGGCGTAACT GGAAGGGCGG CACAATCGAA AAATCTGTAA AGCAGGCAAA TATAACTCAA
AAAACTCTTG ACTCCTTAAT TTCCGCCATC GAAGATTCTC TTCCTTCATG GAGAAAGTAT
TTAAAGGCTA AGGCCATGCT CTTAGGCAAA AAGGAATTAC CCTTTTATGA CCTCTTTGCT
CCGGTTTCAA AATCATTTCC GACATATACT TGGGAAGAAG CAAAGGCCTT GGTAATCGAA
AACTTTTCTT CATTTTCAAA GAACATGGGA GACTTTGCAA AAAAGGCCTT TGCCTCCAAC
TGGATAGACG GTGAGGTACG AAACGGCAAG GTCGGCGGAG CCTACTGTAC TCATTTTCCC
GTAACAAAGG AACCCAGAGT TCTTTGCAAT TTTGACGGCT CTTTTTCTTC GGTCAGTACC
TTAGCACACG AGCTGGGACA TGCCTTTCAC TTTAATGTTG TAAAGGATAT GCCTGTAATA
AATCAAAGCT ATCCTATGAC CCTTGCCGAG ACAGCTTCTA TTTTTGCAGA AACCATTTTG
TTTGAAAGCG AAATTAAAAA AATGAATGAA GAGCAAAAGA CGGCTCTATT GGAAATTCAT
CTTCAAGACG GTTGTCAGGT ATTGATCGAT ATTCTTTCTC GTTTTTATTT TGAGCGCTCC
TTTATGGATG AAAGGGAAAA GCATGAACTT ACTGCTGAAG ACTGCTGCCG CCTAATGCTT
GAAGCTCAAA AGAAAAGCTA TGGAAACGGG CTTGATTCTA AATTGCTTCA TCCATATATG
TGGCTTGTTA AGGGGCATTA TTATTCTGCC GACCTGGGCT TTTATAACTT CCCCTATGCT
TTCGGCCAGC TTTTTGCTCT CGGTCTTTAT AACCGCTATA AAAAGGAAGG AGAAAAATTT
ACTTCCGTTT ATGAGGATAT TTTAAGAAAG ACCGGTATGA CGGATGCCGT TAAGGTAACA
AAGAGTGCAG GTTTTAATAT CGAAACGCCT GACTTCTGGA AAGAAGGCAT AAAGATTTTT
ACGGATCAGA TAAGCGAATT TGAAAAACTC GTAAAAAAAG CAAAGAAAAA ATAG
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| Protein sequence | MQNKTAPRWD LKNIYPDFKS KEYAESKKKI PALTSKFEKH LKAFSDKDLK KWLVKALDIL
NEFNAEAETL YAYASAVYTT DTENKEALSE LNSISALFVP FTPLGVRFSN ILASVSKEVK
ALIKNDKDLK YASFYLEDTL FWQKKQMSEE EESLAADLAR SGASAWSKLQ STMTSTASCI
WDEKTKEEKT LVQLRAMAYD KDAAVREKAF KKELELCKSI EKPVAAALNG VKGTSITLNK
RRNWKGGTIE KSVKQANITQ KTLDSLISAI EDSLPSWRKY LKAKAMLLGK KELPFYDLFA
PVSKSFPTYT WEEAKALVIE NFSSFSKNMG DFAKKAFASN WIDGEVRNGK VGGAYCTHFP
VTKEPRVLCN FDGSFSSVST LAHELGHAFH FNVVKDMPVI NQSYPMTLAE TASIFAETIL
FESEIKKMNE EQKTALLEIH LQDGCQVLID ILSRFYFERS FMDEREKHEL TAEDCCRLML
EAQKKSYGNG LDSKLLHPYM WLVKGHYYSA DLGFYNFPYA FGQLFALGLY NRYKKEGEKF
TSVYEDILRK TGMTDAVKVT KSAGFNIETP DFWKEGIKIF TDQISEFEKL VKKAKKK
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