Gene TDE1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1998 
Symbol 
ID2740451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2015440 
End bp2017203 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content43% 
IMG OID637160888 
Productphosphohexose mutase family protein 
Protein accessionNP_972601 
Protein GI42527503 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA ATGAAATATT AAATAGAGCA AAAAAATATG TTTCCGAAGA AAAGGAAGTA 
AAATTCGCAG AAGAGGTTAA GGCTTTAATC GAAAAAAATG ATGAAAAGGA ATTATATGAC
CGCTTTTATA GGGACTTGGA ATTCGGAACG GCAGGTTTAA GGGGAATTAT AGGGGGCGGC
ACAAACCGCA TGAATCCTTT AGTAATAAAA AATGCAACCC AAGGACTTGC GGATTATCTG
ATTGAAGCAA AATCTGAGAA GGCTAAGGCC GGCTCTTTAA GTGCCGTAAT TGCCTACGAT
TCAAGACGCT TTTCGGATGT TTTTGCAAAA ACGGCTGCTC TTATTTTTGC GGCAAACAAT
ATCCGCTGTT ACCTTTTTTC GAGCCTTAGG CCTACGCCGG AACTTTCTTA TGCCATAAGG
GAACTCGGCT GCGATACGGG AATTGTAGTA ACAGCCTCGC ACAACCCTCC CGAATACAAC
GGCTACAAGG CCTACTGGTC GGACGGAGCC CAGATTACCC CGCCCCATGA TTTAGGGATA
ATCAAAAAGG TAGGCGAGGT TTCTTCAATC AAAATGATGA GCGAAGAAGA AGCTCTTAAA
AACGGAAAGC TCGTAATAAT CGATAAAGAA ATCGATGAAA AATACTGGGC TATGCTTAAA
AAGAAAATCA GCCGTCAAGA AATTATTAAA AATATGGCTT CCAAGGTAAA GATAGTTTAC
ACTCCCCTTC ACGGAACGGG AGCTATGCAT GTAGAAAAGG TACTGGGAGA AATGGGCTTT
AATGTTATAA GCGTTCCCGA GCAGCGTGAA CCTGACGGGA ATTTCCCGAC GGTAAGCTAT
CCCAATCCCG AAGACCCCAA AGCCTTAAAG ATGGCCATGG ATTTAGCTAT AAAGGAAGGA
GCCGATATTC TGATGGCCAC AGATCCCGAT GCCGACCGCT TTGCCTGTGC AGTAAAAAAC
GATGCAGGCG AAATGCAGCT TATAAGCGGC AATCAGATGG GAGCCCTCTT TGCGGATTAT
ATCTGTCTTA CATTAAAAGA ACAAAATAAA CTGCCTCAAA ATGCCGCAAT AGTACGCTCG
ATAGTAACCT CCCCCTTAAG CGATTTGATT GCGGCCTCTT ACAATGTGCA AAGCGAAGAA
TGTCTTACCG GCTTTAAGTG GATATGCGGC GTTGCCGAAA GAATGGTAAG CACGGGCTCC
CACTCCTATC TTTACGGTTA TGAAGAAAGC TTCGGCTACA ACTTCGGAAC CGAGGTAAGA
GATAAGGACG GTATTGCCTC TTCTGCAATT TGTGCCGAGA TGACCCTCTA TTGGAGGAGC
AAGGGAAAGA GTCTTTTAGA CAGGCTAAAC GAAATCTTTT CTCAATTCGG TTTTTACGGA
GAAAAGACCA TCAATATGGT ATACCCGGGA GCAGAAGGCT TAAAGATTAT GCAGGACATG
ATGGTAAGAG TTCGGGAAAG AAATTTAAGC GAAATCGCCG GCGTGAAGGT AAAAACCATC
AGGGATATTC AGGAAAGCAC GGAATATTCT CCATTAGAGC CGGCCAAAAA AACTAAGGTT
ACTTTACCTA AGAGCAATGT TCTTCAATAT TATTTGGAAG ACGGCTCCAT AATATGCATA
AGGCCCAGCG GCACCGAACC CAAGATAAAG ATCTACATAA TCCATTCCGA AAAGGTTGTT
TCATCGGTTG AAGAAGCTAA AAAACAATCG GATAAAAAGA TTGCCGAATT CGAAAAAGAA
TTTAACGGTG TACTAAACGC ATAA
 
Protein sequence
MDKNEILNRA KKYVSEEKEV KFAEEVKALI EKNDEKELYD RFYRDLEFGT AGLRGIIGGG 
TNRMNPLVIK NATQGLADYL IEAKSEKAKA GSLSAVIAYD SRRFSDVFAK TAALIFAANN
IRCYLFSSLR PTPELSYAIR ELGCDTGIVV TASHNPPEYN GYKAYWSDGA QITPPHDLGI
IKKVGEVSSI KMMSEEEALK NGKLVIIDKE IDEKYWAMLK KKISRQEIIK NMASKVKIVY
TPLHGTGAMH VEKVLGEMGF NVISVPEQRE PDGNFPTVSY PNPEDPKALK MAMDLAIKEG
ADILMATDPD ADRFACAVKN DAGEMQLISG NQMGALFADY ICLTLKEQNK LPQNAAIVRS
IVTSPLSDLI AASYNVQSEE CLTGFKWICG VAERMVSTGS HSYLYGYEES FGYNFGTEVR
DKDGIASSAI CAEMTLYWRS KGKSLLDRLN EIFSQFGFYG EKTINMVYPG AEGLKIMQDM
MVRVRERNLS EIAGVKVKTI RDIQESTEYS PLEPAKKTKV TLPKSNVLQY YLEDGSIICI
RPSGTEPKIK IYIIHSEKVV SSVEEAKKQS DKKIAEFEKE FNGVLNA